Parental gene:

EBAG9, ENSFCAG00000025490

Aliases:None
Description:estrogen receptor binding site associated, antigen, 9 [Source:HGNC Symbol;Acc:3123]
Organism:Cat (Felis catus)
Coordinates:F2:53979669..54006492(+)


>ENSFCAG00000025490
ATGGCTATTACACAGTTTCGGTTATTCAAAGTTTGTACCTGCCTAGCAACAGTATTCTCATTCCTAAAGAGATTAATATG
CAGATCTGGTAGAGGACGGAAATTAAGTGGAGACCAAATAACTTTACCAACTACAGTTGATTATTCATCAGTTCCTAAAC
AGGCAGATGTTGAAGAGTGGACGTCCTGGGATGAAGATGCACCCACAAGTGTAAAGATTGAAGGAGGGAATGGGAATGTG
ACGACACAACAAAATGCTTTGGAACAACTGGAACCTGACTATTTTAAGGACATGACACCAACTATAAGGAAAACTCAGAA
AATAATTATTAAGAAGAGAGAACCATTAAATTTTGGCATCCCAGATGGTAGCACAGGTTTCTCTAGTAGATTAGCAGCTA
CACAAGATATGCCTTTTCTTCATCAATCTCCTGAATTAGGTGACTTAGATACCTGGCAGGAAAATACCAATGCATGGGAA
GAAGAAGAAGATGCGGCCTGGCAAGCAGAAGAAGTTTTGAGGCAGCAGAAGATAGCAGACCGAGAAAAGAGAGCGGCGGA
ACAACAAAGGAAGAAAATGGAAAAGGAGGCACAGCGGCTGATGAAGAAGGAACAAAACAAAATTGGTGTGAAGCTTTCAT
AG

Library Parental gene expression (RPM)
SRP017611_liver 15 .16 RPM
SRP017611_kidney 39 .26 RPM
SRP017611_brain 28 .23 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006190 ortholog_one2one 1 retrogene
retro_amel_1656,
Choloepus hoffmanni ENSCHOG00000007848 ortholog_one2one 5 retrogenes
retro_chof_1116, retro_chof_1455, retro_chof_1805, retro_chof_2245, retro_chof_751,
Cavia porcellus ENSCPOG00000001059 ortholog_one2one 1 retrogene
retro_cpor_1185,
Dipodomys ordii ENSDORG00000010177 ortholog_one2one 2 retrogenes
retro_dord_418, retro_dord_91,
Equus caballus ENSECAG00000009719 ortholog_one2one 2 retrogenes
retro_ecab_211, retro_ecab_232,
Macropus eugenii ENSMEUG00000014115 ortholog_one2one 3 retrogenes
retro_meug_1871, retro_meug_2058, retro_meug_597,
Monodelphis domestica ENSMODG00000004795 ortholog_one2many 2 retrogenes
retro_mdom_261, retro_mdom_665,
Mus musculus ENSMUSG00000022339 ortholog_one2one 1 retrogene
retro_mmus_3501,
Rattus norvegicus ENSRNOG00000004220 ortholog_one2one 2 retrogenes
retro_rnor_2914, retro_rnor_2980,
Sus scrofa ENSSSCG00000006024 ortholog_one2one 1 retrogene
retro_sscr_569,
Ictidomys tridecemlineatus ENSSTOG00000015326 ortholog_one2one 1 retrogene
retro_itri_1119,
Tursiops truncatus ENSTTRG00000001745 ortholog_one2one 2 retrogenes
retro_ttru_496, retro_ttru_672,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_777 72.40 88.73
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Download FASTA sequences of all ENSFCAG00000025490 retrocopies