Parental gene:

PRR3, ENSFCAG00000025918

Aliases:None
Description:proline rich 3 [Source:HGNC Symbol;Acc:21149]
Organism:Cat (Felis catus)
Coordinates:B2:32079977..32084068(+)


>ENSFCAG00000025918
ACCCAACGGAAGCGGAAACAGAATCCCAGCGTGCCCCTTCCTCACTGCCCTCCAAATCCCGCTGCAGCCATTGCCGCAAC
CACGATGCCGAAACGAAAGAAGCAGAGTCAGCAGCAGCAGCCGCCACTGCAGCAGCCCCCGCTGCCAGAGCGGGAAGAGA
CTGGAGACGAGGAGGATGGGAGTCCCATAGGACCACCCAGCCTTCTGGGCCCTCCCCCCATGGCCAATGGAAAGCCTGGT
GACCCCAAGTCAGCTCTTCACAGAGGTCCTCCAGGCTCAAGGGGACCAATGATTCCACCACTGCTGAGTCTCCCACCTCC
TCCCCGGGGCAGAGGCCCAATTCGGGGGGGCGTAGGCCCCAGATGTGGCCCATATGGTCGTGGTTGGTGGGGGGCCAATA
CTGAACCTCCTTTTCCTGGACCAGGCCATGGGGGTCCTAGGGGAGGCTTTCACAAAGAGCAGAGAAATCCTCGAAGGCTC
AAAAGTTGGTCTCTTATCAATGCCTGCCCACCCAAGGATGGCCCCCAAGTTATGGAAGACAAATCCAACCGCCCTGTCTG
CCGACACTTTGCCAAAAAGGGCCACTGTCGATATGAGGACCTCTGTGCCTTCTACCACCCAGGCGTCAATGGACCTCCTC
TGTGA

Library Parental gene expression (RPM)
SRP017611_liver 3 .74 RPM
SRP017611_kidney 6 .08 RPM
SRP017611_brain 10 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Cavia porcellus ENSCPOG00000022770 ortholog_one2one 1 retrogene
retro_cpor_775,
Gorilla gorilla ENSGGOG00000014604 ortholog_one2one 1 retrogene
retro_ggor_1915,
Myotis lucifugus ENSMLUG00000008758 ortholog_one2one 1 retrogene
retro_mluc_1567,
Macaca mulatta ENSMMUG00000013893 ortholog_one2one 1 retrogene
retro_mmul_1431,
Nomascus leucogenys ENSNLEG00000005104 ortholog_one2one 1 retrogene
retro_nleu_1548,
Otolemur garnettii ENSOGAG00000004430 ortholog_one2one 2 retrogenes
retro_ogar_1030, retro_ogar_1324,
Pongo abelii ENSPPYG00000016409 ortholog_one2one 1 retrogene
retro_pabe_2279,
Pan troglodytes ENSPTRG00000017929 ortholog_one2one 1 retrogene
retro_ptro_1861,
Sorex araneus ENSSARG00000002747 ortholog_one2many 2 retrogenes
retro_sara_143, retro_sara_9,
Ictidomys tridecemlineatus ENSSTOG00000011829 ortholog_one2many 1 retrogene
retro_itri_126,
Tarsius syrichta ENSTSYG00000000166 ortholog_one2one 2 retrogenes
retro_tsyr_308, retro_tsyr_841,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_1094 77.04 90.19
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2. retro_fcat_1698 65.10 66.36
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Download FASTA sequences of all ENSFCAG00000025918 retrocopies