Parental gene:

LPCAT2, ENSG00000087253

Aliases:LPCAT2, AYTL1, LysoPAFAT
Description:lysophosphatidylcholine acyltransferase 2 [Source:HGNC Symbol;Acc:26032]
Organism:Human (Homo sapiens)
Coordinates:16:55542909..55620582(+)


>ENSG00000087253
ATGAGCCGGTGCGCCCAGGCGGCGGAAGTGGCGGCCACAGTGCCAGGTGCCGGCGTCGGGAACGTGGGGCTGCGGCCGCC
CATGGTGCCCCGTCAGGCGTCCTTCTTCCCGCCGCCGGTGCCGAACCCCTTCGTGCAGCAGACGCAGATCGGCTCCGCGA
GGCGGGTCCAGATTGTCCTTCTTGGGATTATCTTGCTTCCAATTCGTGTCTTATTGGTTGCGTTAATTTTATTACTTGCA
TGGCCATTTGCTGCAATTTCAACAGTATGCTGTCCTGAAAAGCTGACCCACCCAATAACTGGTTGGAGGAGGAAAATTAC
TCAAACAGCTTTGAAATTTCTGGGTCGTGCTATGTTCTTTTCAATGGGATTTATAGTTGCTGTAAAAGGAAAGATTGCAA
GTCCTTTGGAAGCACCAGTTTTTGTTGCTGCCCCTCATTCAACATTCTTTGATGGAATTGCCTGTGTTGTAGCTGGGTTA
CCTTCTATGGTATCTCGAAATGAGAATGCACAAGTCCCTCTGATTGGCAGACTGTTACGGGCTGTGCAACCAGTTTTGGT
GTCCCGTGTAGATCCGGATTCCCGAAAAAACACAATAAATGAAATAATAAAGCGAACAACATCAGGAGGAGAATGGCCCC
AGATACTAGTTTTCCCAGAAGGTACTTGTACTAATCGTTCCTGTTTGATTACTTTTAAACCAGGAGCCTTCATTCCAGGA
GTTCCAGTGCAGCCAGTCCTCCTCAGATACCCAAACAAGCTGGATACTGTGACCTGGACATGGCAAGGATATACATTCAT
TCAGCTTTGTATGCTTACTTTCTGCCAGCTCTTCACAAAGGTAGAAGTTGAGTTTATGCCAGTTCAAGTACCAAATGATG
AAGAAAAAAATGATCCTGTCCTTTTTGCCAATAAAGTCCGGAATTTAATGGCAGAAGCTCTGGGAATACCAGTAACAGAT
CATACCTATGAAGACTGCAGATTGATGATTTCAGCAGGACAGCTAACATTGCCTATGGAAGCTGGGCTGGTGGAATTTAC
TAAAATTAGCCGAAAATTGAAATTAGATTGGGATGGTGTTCGTAAGCATTTGGATGAATATGCATCTATTGCGAGTTCCT
CAAAAGGAGGAAGAATTGGAATTGAAGAATTCGCCAAGTATTTAAAGTTGCCTGTTTCAGATGTCTTGAGACAACTTTTT
GCACTCTTTGACAGGAACCATGATGGCAGCATTGACTTCCGAGAGTATGTGATTGGCCTGGCTGTCTTGTGCAACCCTTC
CAACACAGAGGAGATCATCCAGGTGGCATTTAAGCTGTTTGACGTTGATGAGGATGGCTACATAACGGAGGAAGAGTTCT
CCACCATTCTACAGGCTTCCCTTGGAGTGCCTGACCTTGATGTTTCTGGTCTCTTCAAGGAAATAGCCCAAGGGGACTCA
ATTTCCTATGAGGAATTTAAAAGTTTTGCCTTAAAGCATCCAGAATATGCTAAGATATTTACAACATACCTAGACCTCCA
GACGTGCCATGTGTTTTCATTACCAAAAGAAGTCCAGACAACCCCCTCCACCGCCAGTAATAAAGTCAGCCCTGAAAAGC
ATGAAGAGAGTACCTCAGACAAAAAAGATGACTGA

Library Parental gene expression (RPM)
bodymap2_adipose 54 .80 RPM
bodymap2_adrenal 19 .86 RPM
bodymap2_brain 40 .11 RPM
bodymap2_breast 38 .64 RPM
bodymap2_colon 59 .69 RPM
bodymap2_heart 19 .72 RPM
bodymap2_kidney 46 .22 RPM
bodymap2_liver 3 .42 RPM
bodymap2_lung 25 .02 RPM
bodymap2_lymph_node 39 .36 RPM
bodymap2_ovary 71 .96 RPM
bodymap2_prostate 64 .07 RPM
bodymap2_skeletal_muscle 9 .57 RPM
bodymap2_testis 48 .57 RPM
bodymap2_thyroid 261 .08 RPM
bodymap2_white_blood_cells 119 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000019272 ortholog_one2one 1 retrogene
retro_btau_64,
Callithrix jacchus ENSCJAG00000012902 ortholog_one2one 1 retrogene
retro_cjac_2945,
Dasypus novemcinctus ENSDNOG00000006859 ortholog_one2one 1 retrogene
retro_dnov_1735,
Dipodomys ordii ENSDORG00000013193 ortholog_one2one 1 retrogene
retro_dord_399,
Equus caballus ENSECAG00000009649 ortholog_one2one 1 retrogene
retro_ecab_865,
Erinaceus europaeus ENSEEUG00000014277 ortholog_one2one 1 retrogene
retro_eeur_109,
Gorilla gorilla ENSGGOG00000005144 ortholog_one2one 1 retrogene
retro_ggor_266,
Loxodonta africana ENSLAFG00000003965 ortholog_one2one 1 retrogene
retro_lafr_66,
Myotis lucifugus ENSMLUG00000004008 ortholog_one2one 1 retrogene
retro_mluc_88,
Macaca mulatta ENSMMUG00000004478 ortholog_one2one 1 retrogene
retro_mmul_392,
Mus musculus ENSMUSG00000033192 ortholog_one2one 1 retrogene
retro_mmus_270,
Nomascus leucogenys ENSNLEG00000001258 ortholog_one2one 1 retrogene
retro_nleu_994,
Pongo abelii ENSPPYG00000007358 ortholog_one2one 1 retrogene
retro_pabe_445,
Pan troglodytes ENSPTRG00000008124 ortholog_one2one 2 retrogenes
retro_ptro_171, retro_ptro_2928,
Pteropus vampyrus ENSPVAG00000007801 ortholog_one2one 1 retrogene
retro_pvam_173,
Rattus norvegicus ENSRNOG00000016643 ortholog_one2one 1 retrogene
retro_rnor_309,
Sorex araneus ENSSARG00000011914 ortholog_one2one 1 retrogene
retro_sara_88,
Sarcophilus harrisii ENSSHAG00000012383 ortholog_one2one 1 retrogene
retro_shar_116,
Tursiops truncatus ENSTTRG00000001182 ortholog_one2one 1 retrogene
retro_ttru_188,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_185 59.66 65.26
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000087253 retrocopies