Parental gene: | DDX18, ENSG00000088205 |
| Aliases: | DDX18, MrDb |
| Description: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:HGNC Symbol;Acc:2741] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 2:118572225..118589955(+) |
>ENSG00000088205
ATGTCACACCTGCCGATGAAACTCCTGCGTAAGAAGATCGAGAAGCGGAACCTCAAATTGCGGCAGCGGAACCTAAAGTT
TCAGGGGGCCTCAAATCTGACCCTATCGGAAACTCAAAATGGAGATGTATCTGAAGAAACAATGGGAAGTAGAAAGGTTA
AAAAATCAAAACAAAAGCCCATGAATGTGGGCTTATCAGAAACTCAAAATGGAGGCATGTCTCAAGAAGCAGTGGGAAAT
ATAAAAGTTACAAAGTCTCCCCAGAAATCCACTGTATTAACCAATGGAGAAGCAGCAATGCAGTCTTCCAATTCAGAATC
AAAAAAGAAAAAGAAGAAAAAGAGAAAAATGGTGAATGATGCTGAGCCTGATACGAAAAAAGCAAAAACTGAAAACAAAG
GGAAATCTGAAGAAGAAAGTGCCGAGACTACTAAAGAAACAGAAAATAATGTGGAGAAGCCAGATAATGATGAAGATGAG
AGTGAGGTGCCCAGTCTGCCCCTGGGACTGACAGGAGCTTTTGAGGATACTTCGTTTGCTTCTCTATGTAATCTTGTCAA
TGAAAACACTCTGAAGGCAATAAAAGAAATGGGTTTTACAAACATGACTGAAATTCAGCATAAAAGTATCAGACCACTTC
TGGAAGGCAGGGATCTTCTAGCAGCTGCAAAAACAGGCAGTGGTAAAACCCTGGCTTTTCTCATCCCTGCAGTTGAACTC
ATTGTTAAGTTAAGGTTCATGCCCAGGAATGGAACAGGAGTCCTTATTCTCTCACCTACTAGAGAACTAGCCATGCAAAC
CTTTGGTGTTCTTAAGGAGCTGATGACTCACCACGTGCATACCTATGGCTTGATAATGGGTGGCAGTAACAGATCTGCTG
AAGCACAGAAACTTGGTAATGGGATCAACATCATTGTGGCCACACCAGGCCGTCTGCTGGACCATATGCAGAATACCCCA
GGATTTATGTATAAAAACCTGCAGTGTCTGGTTATTGATGAAGCTGATCGTATCTTGGATGTGGGGTTTGAAGAGGAATT
AAAGCAAATTATTAAACTTTTGCCAACACGTAGACAGACTATGCTCTTTTCTGCCACCCAAACTCGAAAAGTTGAAGACC
TGGCAAGGATTTCTCTGAAAAAGGAGCCATTGTATGTTGGCGTTGATGATGATAAAGCGAATGCAACAGTGGATGGTCTT
GAACAGGGATATGTTGTTTGTCCTTCTGAAAAGAGATTCCTTCTGCTCTTTACATTCCTTAAGAAGAACCGAAAGAAGAA
GCTTATGGTCTTCTTTTCATCTTGTATGTCTGTGAAATACCACTATGAGTTGCTGAACTACATTGATTTGCCCGTCTTGG
CCATTCATGGAAAGCAAAAGCAAAATAAGCGTACAACCACATTCTTCCAGTTCTGCAATGCAGATTCGGGAACACTATTG
TGTACGGATGTGGCAGCGAGAGGACTAGACATTCCTGAAGTCGACTGGATTGTTCAGTATGACCCTCCGGATGACCCTAA
GGAATATATTCATCGTGTGGGTAGAACAGCCAGAGGCCTAAATGGGAGAGGGCATGCCTTGCTCATTTTGCGCCCAGAAG
AATTGGGTTTTCTTCGCTACTTGAAACAATCCAAGGTTCCATTAAGTGAATTTGACTTTTCCTGGTCTAAAATTTCTGAC
ATTCAGTCTCAGCTTGAGAAATTGATTGAAAAGAATTACTTTCTTCATAAGTCAGCCCAGGAAGCATATAAGTCATACAT
ACGAGCCTATGATTCCCATTCTCTGAAACAGATCTTTAATGTTAATAACCTAAATTTGCCTCAGGTTGCTCTGTCATTTG
GTTTCAAGGTGCCTCCCTTCGTTGATCTGAACGTCAACAGTAATGAAGGCAAGCAGAAAAAGCGAGGAGGTGGTGGTGGA
TTTGGCTACCAGAAAACCAAGAAAGTTGAGAAATCCAAAATCTTTAAACACATTAGCAAGAAATCATCTGACAGCAGGCA
GTTCTCTCACTGA
ATGTCACACCTGCCGATGAAACTCCTGCGTAAGAAGATCGAGAAGCGGAACCTCAAATTGCGGCAGCGGAACCTAAAGTT
TCAGGGGGCCTCAAATCTGACCCTATCGGAAACTCAAAATGGAGATGTATCTGAAGAAACAATGGGAAGTAGAAAGGTTA
AAAAATCAAAACAAAAGCCCATGAATGTGGGCTTATCAGAAACTCAAAATGGAGGCATGTCTCAAGAAGCAGTGGGAAAT
ATAAAAGTTACAAAGTCTCCCCAGAAATCCACTGTATTAACCAATGGAGAAGCAGCAATGCAGTCTTCCAATTCAGAATC
AAAAAAGAAAAAGAAGAAAAAGAGAAAAATGGTGAATGATGCTGAGCCTGATACGAAAAAAGCAAAAACTGAAAACAAAG
GGAAATCTGAAGAAGAAAGTGCCGAGACTACTAAAGAAACAGAAAATAATGTGGAGAAGCCAGATAATGATGAAGATGAG
AGTGAGGTGCCCAGTCTGCCCCTGGGACTGACAGGAGCTTTTGAGGATACTTCGTTTGCTTCTCTATGTAATCTTGTCAA
TGAAAACACTCTGAAGGCAATAAAAGAAATGGGTTTTACAAACATGACTGAAATTCAGCATAAAAGTATCAGACCACTTC
TGGAAGGCAGGGATCTTCTAGCAGCTGCAAAAACAGGCAGTGGTAAAACCCTGGCTTTTCTCATCCCTGCAGTTGAACTC
ATTGTTAAGTTAAGGTTCATGCCCAGGAATGGAACAGGAGTCCTTATTCTCTCACCTACTAGAGAACTAGCCATGCAAAC
CTTTGGTGTTCTTAAGGAGCTGATGACTCACCACGTGCATACCTATGGCTTGATAATGGGTGGCAGTAACAGATCTGCTG
AAGCACAGAAACTTGGTAATGGGATCAACATCATTGTGGCCACACCAGGCCGTCTGCTGGACCATATGCAGAATACCCCA
GGATTTATGTATAAAAACCTGCAGTGTCTGGTTATTGATGAAGCTGATCGTATCTTGGATGTGGGGTTTGAAGAGGAATT
AAAGCAAATTATTAAACTTTTGCCAACACGTAGACAGACTATGCTCTTTTCTGCCACCCAAACTCGAAAAGTTGAAGACC
TGGCAAGGATTTCTCTGAAAAAGGAGCCATTGTATGTTGGCGTTGATGATGATAAAGCGAATGCAACAGTGGATGGTCTT
GAACAGGGATATGTTGTTTGTCCTTCTGAAAAGAGATTCCTTCTGCTCTTTACATTCCTTAAGAAGAACCGAAAGAAGAA
GCTTATGGTCTTCTTTTCATCTTGTATGTCTGTGAAATACCACTATGAGTTGCTGAACTACATTGATTTGCCCGTCTTGG
CCATTCATGGAAAGCAAAAGCAAAATAAGCGTACAACCACATTCTTCCAGTTCTGCAATGCAGATTCGGGAACACTATTG
TGTACGGATGTGGCAGCGAGAGGACTAGACATTCCTGAAGTCGACTGGATTGTTCAGTATGACCCTCCGGATGACCCTAA
GGAATATATTCATCGTGTGGGTAGAACAGCCAGAGGCCTAAATGGGAGAGGGCATGCCTTGCTCATTTTGCGCCCAGAAG
AATTGGGTTTTCTTCGCTACTTGAAACAATCCAAGGTTCCATTAAGTGAATTTGACTTTTCCTGGTCTAAAATTTCTGAC
ATTCAGTCTCAGCTTGAGAAATTGATTGAAAAGAATTACTTTCTTCATAAGTCAGCCCAGGAAGCATATAAGTCATACAT
ACGAGCCTATGATTCCCATTCTCTGAAACAGATCTTTAATGTTAATAACCTAAATTTGCCTCAGGTTGCTCTGTCATTTG
GTTTCAAGGTGCCTCCCTTCGTTGATCTGAACGTCAACAGTAATGAAGGCAAGCAGAAAAAGCGAGGAGGTGGTGGTGGA
TTTGGCTACCAGAAAACCAAGAAAGTTGAGAAATCCAAAATCTTTAAACACATTAGCAAGAAATCATCTGACAGCAGGCA
GTTCTCTCACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 37 .73 RPM |
| bodymap2_lung | 65 .21 RPM |
| bodymap2_breast | 74 .57 RPM |
| bodymap2_adipose | 86 .17 RPM |
| bodymap2_adrenal | 106 .48 RPM |
| bodymap2_skeletal_muscle | 31 .87 RPM |
| bodymap2_thyroid | 144 .32 RPM |
| bodymap2_prostate | 96 .02 RPM |
| bodymap2_colon | 91 .59 RPM |
| bodymap2_testis | 84 .58 RPM |
| bodymap2_brain | 58 .67 RPM |
| bodymap2_heart | 34 .01 RPM |
| bodymap2_white_blood_cells | 141 .77 RPM |
| bodymap2_lymph_node | 64 .03 RPM |
| bodymap2_ovary | 123 .02 RPM |
| bodymap2_kidney | 69 .98 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000017166 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000028420 | ortholog_one2one | 4 retrogenes | |
| Microcebus murinus | ENSMICG00000017590 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000017607 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000021343 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000000533 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011769 | ortholog_one2one | 4 retrogenes | |
| Pongo abelii | ENSPPYG00000012796 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000012391 | ortholog_one2one | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_608 | 86.64 | 82.39 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_834 | 88.19 | 63.73 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_1361 | 87.09 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_1579 | 86.38 | 69.70 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_3223 | 87.50 | 58.21 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_hsap_3561 | 88.38 | 61.64 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000088205 retrocopies