Parental gene:

DDX18, ENSMODG00000000533

Aliases:None
Description:DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:HGNC Symbol;Acc:2741]
Organism:Opossum (Monodelphis domestica)
Coordinates:4:123905972..123929036(-)


>ENSMODG00000000533
ATGTCGCACTTACCGATGAAGTTGCTGCGCAAGAAGATCGAGAAGCGCAATGAGAAGCTGCGTCAGAGGAACCAGCGGTT
GAAGATGAAAGAGGCCTTAAAAGCCAATATTCCAGAAGTCCAAGATGAACATGGGTCACAAGAAGCAGTAGAAGAAATAA
AAGAAGAAAAATCTCCCAGGAAATCTACAGTATTAATAGCCAGTGAAGAATCAACTGCACAGCTCCCTAATTCTGAATTG
AAAAAGAAAAAGAAGAAGAAGAGGAAAATAACAACTGATGTGGAACCTGAAAACAAAAAGGCAAAAACCGAAGATAACCA
AAAAGGATCTGATGATGAAGTTGCAAAAGATCCCAAAGTAAAAGAAAACACTGTAGAGGATCAGGAAGAGGATGTTGAAA
TGCCCAGCCTTCCTCATGGACTAACAGGATCCTTTGAGGATACTTCATTCACTTCACTTACTAATATGGTCAATGAAAAC
ACTCTGAAGGCAATAGCAGAAATGGGCTTTACTAACATGACTGAGATTCAGCATAAAAGTATCAGACCACTTCTAGAAGG
CAGGGATATCCTAGCAGCTGCAAAAACGGGCAGTGGCAAAACCCTAGCATTCCTCATTCCTTCAATAGAGCTCATTGTTA
AGTTAAAGTTCATGCCCAGGAATGGAACAGGAGTCCTTATCCTCTCACCTACTCGAGAGCTGGCTATGCAGACCTTTGGT
GTGCTTAAGGAACTGATGACTCACCATGTGCATACCTATGGTTTGATCATGGGAGGTAGTAACAGGTCTGCAGAAGCACA
GAAACTTGCAAATGGGATCAACATTATTGTGGCAACACCTGGCCGACTTCTGGACCATATGCAGAATACCCCAGGATTTA
TGTTTAAAAACCTGCAATGTCTGGTTATTGATGAGGCTGACCGAATTCTTGAGGTTGGGTTTGAGGAAGAAATGAAACAG
ATCATCAAACTTTTGCCAAAACGCAGACAAACAATGCTCTTTTCTGCCACACAAACTCGTAAGGTAGAAGATCTGGCAAA
GATTTCCCTTAAAAAGGAACCATTATATGTTGGTGTTGATGATGATAAAGATACTGCAACAGTAGATGGTCTTGAACAGG
GATATGTTGTTTGTCCATCTGAGAAAAGATTCCTTCTACTCTTTACATTCCTCAAGAAGAACCGGAAGAAGAAACTGATG
GTATTTTTTTCTTCATGTATGTCAGTGAAATATCACTATGAGCTTCTGAACTACATTGATTTACCTGTCATGGCCATTCA
TGGTAAGCAGAAGCAAAATAAGCGGACAACTACATTCTTTCAGTTCTGCAATGCAGATTCTGGGATTTTGCTGTGTACAG
ATGTGGCTGCCAGAGGGCTAGATATTCCTGAAGTAGATTGGATTGTCCAGTATGACCCTCCAGATGATCCAAAGGAATAT
ATTCATCGTGTAGGTAGAACAGCCAGAGGTATAAATGGAAGAGGTCATGCTTTGCTTATTTTACGACCAGAAGAGTTAGG
TTTTCTTCGTTACCTGAAGCAAGCCAAGGTACCATTAAGTGAATTTGAATTTTCCTGGTCAAAAATTTCTGACATTCAGG
CTCAGTTGGAAAAACTAATTGAGAAGAACTACTTCCTTCATAAATCAGCACAGGAGGCATATAAATCCTATGTTCGAGCA
TATGATTCCCATTCTCTGAAGCAAATCTACAATGTTAACAGCTTAAATTTACCTCTAGTTGCTTTATCATTTGGTTTCAA
AGTGCCTCCATTTGTTGACCTGAGTATCCTTTGCTGTATTTTCATATCATTACCTTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000004950 ortholog_one2one 2 retrogenes
retro_cfam_1404, retro_cfam_2116,
Choloepus hoffmanni ENSCHOG00000004191 ortholog_one2one 6 retrogenes
retro_chof_1221, retro_chof_1539, retro_chof_1636, retro_chof_2416, retro_chof_2418, retro_chof_721,
Callithrix jacchus ENSCJAG00000021414 ortholog_one2many 5 retrogenes
retro_cjac_2309, retro_cjac_2743, retro_cjac_4179, retro_cjac_644, retro_cjac_753,
Echinops telfairi ENSETEG00000017166 ortholog_one2one 2 retrogenes
retro_etel_1919, retro_etel_297,
Homo sapiens ENSG00000088205 ortholog_one2one 6 retrogenes
retro_hsap_1361, retro_hsap_1579, retro_hsap_3223, retro_hsap_3561, retro_hsap_608, retro_hsap_834,
Gorilla gorilla ENSGGOG00000028420 ortholog_one2many 4 retrogenes
retro_ggor_1201, retro_ggor_2189, retro_ggor_2402, retro_ggor_535,
Microcebus murinus ENSMICG00000017590 ortholog_one2one 1 retrogene
retro_mmur_1560,
Myotis lucifugus ENSMLUG00000017607 ortholog_one2many 1 retrogene
retro_mluc_2279,
Macaca mulatta ENSMMUG00000021343 ortholog_one2many 1 retrogene
retro_mmul_2192,
Mus musculus ENSMUSG00000001674 ortholog_one2one 1 retrogene
retro_mmus_2865,
Nomascus leucogenys ENSNLEG00000011769 ortholog_one2one 4 retrogenes
retro_nleu_1377, retro_nleu_1396, retro_nleu_266, retro_nleu_437,
Ochotona princeps ENSOPRG00000001701 ortholog_one2one 1 retrogene
retro_opri_1039,
Pongo abelii ENSPPYG00000012796 ortholog_one2one 4 retrogenes
retro_pabe_1128, retro_pabe_1301, retro_pabe_2670, retro_pabe_744,
Pan troglodytes ENSPTRG00000012391 ortholog_one2one 5 retrogenes
retro_ptro_1064, retro_ptro_2174, retro_ptro_2419, retro_ptro_448, retro_ptro_933,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_414 95.03 53.22
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Download FASTA sequences of all ENSMODG00000000533 retrocopies