Parental gene: | C20orf27, ENSG00000101220 |
| Aliases: | None |
| Description: | chromosome 20 open reading frame 27 [Source:HGNC Symbol;Acc:15873] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 20:3734154..3749034(-) |
>ENSG00000101220
ATGGCTGCAGCCAACAAGGGTAAGTGCCTTCCTGGCGTGGTAGGACTTGCACAAGCTCTTCCGGTGGGCCCTGGTAGGAG
GGCCATTGCTGCAGGCAACAAGCCCAGAGTCCGGAGTATCCGCTTTGCGGCAGGCCACGATGCAGAAGGATCCCACAGCC
ACGTCCACTTTGATGAGAAGCTGCATGACTCGGTGGTCATGGTCACCCAGGAGAGTGACAGCAGCTTTCTGGTCAAGGTT
GGCTTCCTGAAGATCCTGCACAGGTATGAGATTACCTTCACTCTGCCCCCAGTGCACAGGCTGAGCAAGGATGTCCGCGA
GGCACCTGTCCCCAGCCTGCACCTCAAGCTCCTCAGCGTGGTGCCCGTCCCTGAAGGTTATAGTGTCAAGTGTGAGTACT
CGGCGCACAAAGAGGGCGTCCTCAAAGAGGAGATACTGCTAGCCTGCGAAGGTGGCACTGGCACCTGTGTGCGCGTGACG
GTGCAGGCCCGCGTCATGGACCGGCACCACGGCACGCCCATGCTGCTGGATGGTGTCAAGTGTGTGGGCGCCGAGCTGGA
ATACGACTCAGAGCACAGCGACTGGCACGGCTTTGACTGA
ATGGCTGCAGCCAACAAGGGTAAGTGCCTTCCTGGCGTGGTAGGACTTGCACAAGCTCTTCCGGTGGGCCCTGGTAGGAG
GGCCATTGCTGCAGGCAACAAGCCCAGAGTCCGGAGTATCCGCTTTGCGGCAGGCCACGATGCAGAAGGATCCCACAGCC
ACGTCCACTTTGATGAGAAGCTGCATGACTCGGTGGTCATGGTCACCCAGGAGAGTGACAGCAGCTTTCTGGTCAAGGTT
GGCTTCCTGAAGATCCTGCACAGGTATGAGATTACCTTCACTCTGCCCCCAGTGCACAGGCTGAGCAAGGATGTCCGCGA
GGCACCTGTCCCCAGCCTGCACCTCAAGCTCCTCAGCGTGGTGCCCGTCCCTGAAGGTTATAGTGTCAAGTGTGAGTACT
CGGCGCACAAAGAGGGCGTCCTCAAAGAGGAGATACTGCTAGCCTGCGAAGGTGGCACTGGCACCTGTGTGCGCGTGACG
GTGCAGGCCCGCGTCATGGACCGGCACCACGGCACGCCCATGCTGCTGGATGGTGTCAAGTGTGTGGGCGCCGAGCTGGA
ATACGACTCAGAGCACAGCGACTGGCACGGCTTTGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 3 .61 RPM |
| bodymap2_lung | 4 .38 RPM |
| bodymap2_breast | 18 .62 RPM |
| bodymap2_adipose | 15 .45 RPM |
| bodymap2_adrenal | 19 .81 RPM |
| bodymap2_skeletal_muscle | 4 .11 RPM |
| bodymap2_thyroid | 7 .46 RPM |
| bodymap2_prostate | 43 .02 RPM |
| bodymap2_colon | 31 .42 RPM |
| bodymap2_testis | 11 .46 RPM |
| bodymap2_brain | 6 .66 RPM |
| bodymap2_heart | 3 .82 RPM |
| bodymap2_white_blood_cells | 25 .40 RPM |
| bodymap2_lymph_node | 10 .49 RPM |
| bodymap2_ovary | 28 .65 RPM |
| bodymap2_kidney | 5 .93 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000021194 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000016987 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022079 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007653 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000010813 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013204 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1114 | 78.33 | 59.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1673 | 72.00 | 85.63 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000101220 retrocopies