Parental gene: | C20orf27, ENSPTRG00000013204 |
| Aliases: | None |
| Description: | chromosome 20 open reading frame 27 [Source:HGNC Symbol;Acc:15873] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 20:3624414..3631004(-) |
>ENSPTRG00000013204
ATGGCTGCAGCCAACAAGGGTAAGTGCCTTCCTGGCCTGGTGGGGCTTGCACAAGCTCTTCCGGTGGGCCCTGGTAGGAG
GGCCATTGCTGCAGGCAACAAGCCCAGAGTCCGGAGTATCCGCTTTGCGGCAGGCCACGATGCAGAAGGATCCCACAGCC
ACGTCCACTTTGATGAGAAGCTGCATGACTCGGTGGTCATGGTCACCCAGGAGAGTGACAGCAGCTTTCTGGTCAAGGTT
GGCTTCCTGAAGATCCTGCACAGGTATGAGATTACCTTCACTCTGCCCCCAGTGCACAGGCTGAGCAAGGATGTCCGCGA
GGCACCTGTCCCCAGCCTGCACCTCAAGCTCCTCAGCGTGGTGCCCATCCCTGAAGGTTATAGTGTCAAGTGTGAGTACT
CGGCGCACAAAGAGGGCGTCCTCAAAGAGGAGATACTGCTAGCCTGCGAAGGTGGCACTGGCACCTGTGTGCGCGTGACG
GTGCAGGCCCGCGTCATGGACCGGCACCACGGCACGCCCATGCTGCTGGATGGTGTCAAGTGTGTGGGCGCCGAGCTGGA
ATACGACTCAGAGCACAGCGACTGGCACGGCTTTGACTGA
ATGGCTGCAGCCAACAAGGGTAAGTGCCTTCCTGGCCTGGTGGGGCTTGCACAAGCTCTTCCGGTGGGCCCTGGTAGGAG
GGCCATTGCTGCAGGCAACAAGCCCAGAGTCCGGAGTATCCGCTTTGCGGCAGGCCACGATGCAGAAGGATCCCACAGCC
ACGTCCACTTTGATGAGAAGCTGCATGACTCGGTGGTCATGGTCACCCAGGAGAGTGACAGCAGCTTTCTGGTCAAGGTT
GGCTTCCTGAAGATCCTGCACAGGTATGAGATTACCTTCACTCTGCCCCCAGTGCACAGGCTGAGCAAGGATGTCCGCGA
GGCACCTGTCCCCAGCCTGCACCTCAAGCTCCTCAGCGTGGTGCCCATCCCTGAAGGTTATAGTGTCAAGTGTGAGTACT
CGGCGCACAAAGAGGGCGTCCTCAAAGAGGAGATACTGCTAGCCTGCGAAGGTGGCACTGGCACCTGTGTGCGCGTGACG
GTGCAGGCCCGCGTCATGGACCGGCACCACGGCACGCCCATGCTGCTGGATGGTGTCAAGTGTGTGGGCGCCGAGCTGGA
ATACGACTCAGAGCACAGCGACTGGCACGGCTTTGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 27 .88 RPM |
| SRP007412_cerebellum | 20 .61 RPM |
| SRP007412_heart | 5 .60 RPM |
| SRP007412_kidney | 16 .34 RPM |
| SRP007412_liver | 17 .55 RPM |
| SRP007412_testis | 27 .19 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000021194 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000101220 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016987 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022079 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000007653 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000010813 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_685 | 80.83 | 59.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_1136 | 69.33 | 74.87 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000013204 retrocopies