Parental gene: | BIN2, ENSG00000110934 |
| Aliases: | BIN2, BRAP-1 |
| Description: | bridging integrator 2 [Source:HGNC Symbol;Acc:1053] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 12:51674821..51718452(-) |
>ENSG00000110934
ATGGCAGAGGGCAAGGCAGGCGGCGCGGCCGGCCTCTTCGCCAAGCAGGTGCAGAAGAAGTTTAGCAGGGCCCAGGAGAA
GGTGCTGCAGAAATTGGGGAAAGCTGTAGAAACCAAAGATGAACGATTTGAACAAAGCGCTAGCAACTTCTACCAACAAC
AGGCAGAAGGCCACAAGCTGTACAAGGACCTGAAGAACTTCCTTAGTGCAGTCAAAGTGATGCATGAAAGTTCAAAAAGA
GTGTCAGAAACCCTGCAGGAGATCTACAGCAGCGAGTGGGACGGTCATGAGGAGCTGAAGGCCATCGTATGGAATAATGA
TCTCCTTTGGGAAGACTACGAGGAGAAACTGGCTGACCAGGCTGTAAGGACCATGGAAATCTATGTTGCCCAGTTCAGTG
AAATTAAGGAGAGAATTGCCAAGCGGGGTCGGAAACTCGTGGACTATGACAGTGCCCGACACCACCTGGAGGCAGTGCAG
AATGCCAAGAAGAAAGATGAGGCCAAGACTGCCAAGGCAGAGGAAGAGTTCAACAAAGCCCAGACTGTGTTTGAAGATCT
GAACCAAGAACTACTAGAGGAGCTGCCTATTCTTTATAATAGTCGTATTGGCTGCTATGTGACCATCTTCCAAAACATTT
CCAACTTGAGGGATGTCTTCTACAGGGAAATGAGCAAGCTGAACCACAATCTCTACGAGGTGATGAGCAAACTGGAGAAG
CAACATTCCAATAAAGTCTTTGTGGTGAAGGGACTGTCAAGCAGCAGCAGGCGCTCTTTAGTCATTTCTCCCCCAGTTCG
AACAGCTACAGTCTCCAGTCCTCTTACCTCACCTACTAGTCCCTCTACACTTTCCTTGAAGAGTGAGAGTGAATCTGTCT
CAGCAACTGAAGATCTGGCACCTGATGCAGCCCAAGGGGAAGACAATTCTGAGATCAAGGAGCTCTTAGAAGAGGAGGAA
ATAGAGAAGGAAGGATCTGAAGCAAGCTCCTCTGAGGAAGATGAGCCTCTACCAGCCTGCAATGGCCCCGCCCAGGCCCA
GCCCTCTCCTACCACTGAAAGGGCCAAGTCCCAGGAGGAAGTTCTCCCCAGCTCCACAACTCCATCACCAGGCGGAGCCC
TGAGCCCTTCAGGGCAGCCTTCATCATCTGCCACAGAAGTAGTCCTCCGAACCCGCACCGCAAGTGAAGGATCTGAACAA
CCAAAGAAGAGAGCCTCTATCCAGAGGACCTCAGCACCCCCTAGTAGGCCTCCTCCACCCAGAGCCACTGCAAGCCCCAG
GCCCTCCTCAGGGAACATACCTTCCAGCCCTACAGCCTCTGGAGGGGGTTCACCCACCAGCCCTAGGGCCTCCTTGGGGA
CTGGGACTGCAAGTCCTAGGACCTCCCTAGAGGTCTCTCCTAATCCAGAACCACCAGAGAAGCCAGTAAGAACTCCTGAG
GCCAAAGAAAATGAAAACATCCACAATCAGAACCCTGAAGAACTTTGTACTTCCCCCACCTTAATGACATCTCAGGTTGC
TTCAGAGCCTGGAGAGGCAAAGAAGATGGAAGACAAGGAAAAGGATAATAAGCTTATCTCAGCTAACTCCTCGGAGGGCC
AAGACCAGCTTCAAGTCTCCATGGTACCAGAAAACAACAACCTCACAGCACCTGAACCTCAAGAAGAGGTATCCACAAGT
GAAAATCCACAACTCTGA
ATGGCAGAGGGCAAGGCAGGCGGCGCGGCCGGCCTCTTCGCCAAGCAGGTGCAGAAGAAGTTTAGCAGGGCCCAGGAGAA
GGTGCTGCAGAAATTGGGGAAAGCTGTAGAAACCAAAGATGAACGATTTGAACAAAGCGCTAGCAACTTCTACCAACAAC
AGGCAGAAGGCCACAAGCTGTACAAGGACCTGAAGAACTTCCTTAGTGCAGTCAAAGTGATGCATGAAAGTTCAAAAAGA
GTGTCAGAAACCCTGCAGGAGATCTACAGCAGCGAGTGGGACGGTCATGAGGAGCTGAAGGCCATCGTATGGAATAATGA
TCTCCTTTGGGAAGACTACGAGGAGAAACTGGCTGACCAGGCTGTAAGGACCATGGAAATCTATGTTGCCCAGTTCAGTG
AAATTAAGGAGAGAATTGCCAAGCGGGGTCGGAAACTCGTGGACTATGACAGTGCCCGACACCACCTGGAGGCAGTGCAG
AATGCCAAGAAGAAAGATGAGGCCAAGACTGCCAAGGCAGAGGAAGAGTTCAACAAAGCCCAGACTGTGTTTGAAGATCT
GAACCAAGAACTACTAGAGGAGCTGCCTATTCTTTATAATAGTCGTATTGGCTGCTATGTGACCATCTTCCAAAACATTT
CCAACTTGAGGGATGTCTTCTACAGGGAAATGAGCAAGCTGAACCACAATCTCTACGAGGTGATGAGCAAACTGGAGAAG
CAACATTCCAATAAAGTCTTTGTGGTGAAGGGACTGTCAAGCAGCAGCAGGCGCTCTTTAGTCATTTCTCCCCCAGTTCG
AACAGCTACAGTCTCCAGTCCTCTTACCTCACCTACTAGTCCCTCTACACTTTCCTTGAAGAGTGAGAGTGAATCTGTCT
CAGCAACTGAAGATCTGGCACCTGATGCAGCCCAAGGGGAAGACAATTCTGAGATCAAGGAGCTCTTAGAAGAGGAGGAA
ATAGAGAAGGAAGGATCTGAAGCAAGCTCCTCTGAGGAAGATGAGCCTCTACCAGCCTGCAATGGCCCCGCCCAGGCCCA
GCCCTCTCCTACCACTGAAAGGGCCAAGTCCCAGGAGGAAGTTCTCCCCAGCTCCACAACTCCATCACCAGGCGGAGCCC
TGAGCCCTTCAGGGCAGCCTTCATCATCTGCCACAGAAGTAGTCCTCCGAACCCGCACCGCAAGTGAAGGATCTGAACAA
CCAAAGAAGAGAGCCTCTATCCAGAGGACCTCAGCACCCCCTAGTAGGCCTCCTCCACCCAGAGCCACTGCAAGCCCCAG
GCCCTCCTCAGGGAACATACCTTCCAGCCCTACAGCCTCTGGAGGGGGTTCACCCACCAGCCCTAGGGCCTCCTTGGGGA
CTGGGACTGCAAGTCCTAGGACCTCCCTAGAGGTCTCTCCTAATCCAGAACCACCAGAGAAGCCAGTAAGAACTCCTGAG
GCCAAAGAAAATGAAAACATCCACAATCAGAACCCTGAAGAACTTTGTACTTCCCCCACCTTAATGACATCTCAGGTTGC
TTCAGAGCCTGGAGAGGCAAAGAAGATGGAAGACAAGGAAAAGGATAATAAGCTTATCTCAGCTAACTCCTCGGAGGGCC
AAGACCAGCTTCAAGTCTCCATGGTACCAGAAAACAACAACCTCACAGCACCTGAACCTCAAGAAGAGGTATCCACAAGT
GAAAATCCACAACTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 4 .06 RPM |
| bodymap2_lung | 22 .20 RPM |
| bodymap2_breast | 2 .76 RPM |
| bodymap2_adipose | 8 .81 RPM |
| bodymap2_adrenal | 33 .84 RPM |
| bodymap2_skeletal_muscle | 0 .60 RPM |
| bodymap2_thyroid | 1 .75 RPM |
| bodymap2_prostate | 4 .24 RPM |
| bodymap2_colon | 2 .32 RPM |
| bodymap2_testis | 11 .97 RPM |
| bodymap2_brain | 3 .05 RPM |
| bodymap2_heart | 1 .83 RPM |
| bodymap2_white_blood_cells | 321 .50 RPM |
| bodymap2_lymph_node | 36 .77 RPM |
| bodymap2_ovary | 3 .62 RPM |
| bodymap2_kidney | 2 .09 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000009423 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000002387 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017774 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004526 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000004954 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2952 | 87.53 | 70.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_3192 | 84.28 | 77.52 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000110934 retrocopies