Parental gene: | BIN2, ENSPTRG00000004954 |
| Aliases: | None |
| Description: | bridging integrator 2 [Source:HGNC Symbol;Acc:1053] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 12:37984417..38028581(+) |
>ENSPTRG00000004954
ATGGCAGAGGGCAAGGCAGGCGGCGCGGCCGGCCTCTTTGCCAAGCAAGTGCAGAAGAAGTTTAGCAGGGCCCAGGAGAA
GGTGCTGCAGAAATTGGGGAAAGCTGTAGAAACCAAAGATGAACGATTTGAACAAAGCGCTAACAACTTCTACCAACAAC
AGGCAGAAGGCCACAAGCTGTACAAGGACCTGAAGAACTTCCTTAGTGCAGTCAAAGTGATGCATGAAAGTTCAAAAAGA
GTGTCAGAAACCCTGCAGGAGATCTACAGCAGTGAGTGGGACGGTCATGAGGAGCTGAAGGCCATCGTAGGGAATAATGA
TCTCCTTTGGGAAGACTACGAGGAGAAACTGGCTGACCAGGCTGTGAGGACCATGGACAACTATGTTGCCCAGTTCAGTG
AAATTAAGGAGAGAATTGCCAAGCGGGGTCGGAAACTCGTGGACTATGACAGTGCCCGACATCACCTGGAGGCAGTTCAG
AATGCCAAGAAGAAAGATGAGGCCAAGACTGCCAAGGCAGAGGAAGAGTTCAACAAAGCCCAGACTGTGTTTGAAGATCT
GAACCAAGAACTACTAGAGGAGCTGCCTATTCTTTATAATAGTCGTATTGGCTGCTATGTGACCATCTTCCAAAACATTT
CCAACTTGAGGGATGTCTTCTACAGGGAAATGAGCAAGCTGAACCACAATCTCTACGAGGTGATGAGCAAACTGGAGAAG
CAACATTCCAATAAAGTCTTTGTGGTGAAGGGACTGTCAAGCAGCAGCAGGCGCTCTTTAGTCATTTCTCCCCCAGTTCA
AACAGCTACAGTCTCCAGTCCTCTTACCTCACCTACTAGTCCCTCTACACTTTCCTTGAAGAGTGAGAGTGAATCTGTCT
CAGCAACTGAAGATCTGGCACCTGACGCAGCCCAGGGGGAAGACAATTCTGAGATCAAGGAGCTCTTAGAAGAGGAGGAA
ATAGAGAAGGAAGGATCTGAAGCAAGCTCCTCTGAGGAAGATGAGCCTCTACCAGCCTGCAATGGCCCCGCCCAGGCTCA
GCCCTCTCCTACCACTGAGAGTGCCAAGTCCCAGGAGGAAGTTCTCCCCAGCTCCCCAGCTCCATCACCAGGCGGAGCCC
TGAGCCCTTCAGGGCAGCCTTCATCATCTGCCGCAGAAGTAGTCCTCCGAACCCGCACCGCAAGTGAAGGATCTGAACAA
CCAAAGAAGAGAGCCTCTATCCAGAGGACCTCAGCACCCCCTAGTAGGCCTCCTCCACCCAGAGCCACTGCAAGCCCCAG
GCCCTCCTCAGGGAACATACCTTCCAGCCCTACAGCCTCTGGAGGGGGTTCACCCACCAGCCCTAGGGCCTCCTTGGGGA
CTGGGACTCCAAGTCCTAGGACCTCCCTAGAGGTCTCTCCTAATCCAGAACCACCAGAGAAGCCAGTAAGAACTCCTGAG
GCCAAAGAAAATGAAAACATCCACAATCAGAACCCCGAAGAACTTTGTACTTCCCCCACCTTAATGACATCTCAGGTTGC
TTCAGAGCCTGGAGAGGCAAAGAAGATGGAAGACAAGGAAGAGGATAATAAGCTTATCTCAGCTGACTCCTCAGAGGGCC
AAGACCAGCTTCAAGTCTTCACGGTACCAGAAAACAACAACCTCACAGCACCTGAACCTCAAGAAGAGGTATCTACAAGT
GAAAATCCACAACTCTGA
ATGGCAGAGGGCAAGGCAGGCGGCGCGGCCGGCCTCTTTGCCAAGCAAGTGCAGAAGAAGTTTAGCAGGGCCCAGGAGAA
GGTGCTGCAGAAATTGGGGAAAGCTGTAGAAACCAAAGATGAACGATTTGAACAAAGCGCTAACAACTTCTACCAACAAC
AGGCAGAAGGCCACAAGCTGTACAAGGACCTGAAGAACTTCCTTAGTGCAGTCAAAGTGATGCATGAAAGTTCAAAAAGA
GTGTCAGAAACCCTGCAGGAGATCTACAGCAGTGAGTGGGACGGTCATGAGGAGCTGAAGGCCATCGTAGGGAATAATGA
TCTCCTTTGGGAAGACTACGAGGAGAAACTGGCTGACCAGGCTGTGAGGACCATGGACAACTATGTTGCCCAGTTCAGTG
AAATTAAGGAGAGAATTGCCAAGCGGGGTCGGAAACTCGTGGACTATGACAGTGCCCGACATCACCTGGAGGCAGTTCAG
AATGCCAAGAAGAAAGATGAGGCCAAGACTGCCAAGGCAGAGGAAGAGTTCAACAAAGCCCAGACTGTGTTTGAAGATCT
GAACCAAGAACTACTAGAGGAGCTGCCTATTCTTTATAATAGTCGTATTGGCTGCTATGTGACCATCTTCCAAAACATTT
CCAACTTGAGGGATGTCTTCTACAGGGAAATGAGCAAGCTGAACCACAATCTCTACGAGGTGATGAGCAAACTGGAGAAG
CAACATTCCAATAAAGTCTTTGTGGTGAAGGGACTGTCAAGCAGCAGCAGGCGCTCTTTAGTCATTTCTCCCCCAGTTCA
AACAGCTACAGTCTCCAGTCCTCTTACCTCACCTACTAGTCCCTCTACACTTTCCTTGAAGAGTGAGAGTGAATCTGTCT
CAGCAACTGAAGATCTGGCACCTGACGCAGCCCAGGGGGAAGACAATTCTGAGATCAAGGAGCTCTTAGAAGAGGAGGAA
ATAGAGAAGGAAGGATCTGAAGCAAGCTCCTCTGAGGAAGATGAGCCTCTACCAGCCTGCAATGGCCCCGCCCAGGCTCA
GCCCTCTCCTACCACTGAGAGTGCCAAGTCCCAGGAGGAAGTTCTCCCCAGCTCCCCAGCTCCATCACCAGGCGGAGCCC
TGAGCCCTTCAGGGCAGCCTTCATCATCTGCCGCAGAAGTAGTCCTCCGAACCCGCACCGCAAGTGAAGGATCTGAACAA
CCAAAGAAGAGAGCCTCTATCCAGAGGACCTCAGCACCCCCTAGTAGGCCTCCTCCACCCAGAGCCACTGCAAGCCCCAG
GCCCTCCTCAGGGAACATACCTTCCAGCCCTACAGCCTCTGGAGGGGGTTCACCCACCAGCCCTAGGGCCTCCTTGGGGA
CTGGGACTCCAAGTCCTAGGACCTCCCTAGAGGTCTCTCCTAATCCAGAACCACCAGAGAAGCCAGTAAGAACTCCTGAG
GCCAAAGAAAATGAAAACATCCACAATCAGAACCCCGAAGAACTTTGTACTTCCCCCACCTTAATGACATCTCAGGTTGC
TTCAGAGCCTGGAGAGGCAAAGAAGATGGAAGACAAGGAAGAGGATAATAAGCTTATCTCAGCTGACTCCTCAGAGGGCC
AAGACCAGCTTCAAGTCTTCACGGTACCAGAAAACAACAACCTCACAGCACCTGAACCTCAAGAAGAGGTATCTACAAGT
GAAAATCCACAACTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 4 .52 RPM |
| SRP007412_cerebellum | 4 .30 RPM |
| SRP007412_heart | 2 .71 RPM |
| SRP007412_kidney | 9 .07 RPM |
| SRP007412_liver | 7 .89 RPM |
| SRP007412_testis | 61 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000110934 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000009423 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000002387 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017774 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000004526 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_2049 | 88.50 | 69.98 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2251 | 85.19 | 81.26 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000004954 retrocopies