Parental gene: | GPN3, ENSG00000111231 |
| Aliases: | GPN3, ATPBD1C |
| Description: | GPN-loop GTPase 3 [Source:HGNC Symbol;Acc:30186] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 12:110890288..110907019(-) |
>ENSG00000111231
ATGCTCCCCAAAACAAGAGGTGCCTTCCACTTCAGTATTCCAGATCCTCAGCACATTTGCAAATCGCGAGGGTCACCATA
CAGGTCAAACGTCTGCACGCAAACCACGGACCGAAGCACGTGGCGCAAGGATGCGGAGCTTTATCTGTTGTCCGTTATTA
CTCAGAGCACCTACTGTGCCACCATGGTCCAGCACTGTGAAGCCCTCAACCGGTCTGTCCAAGTTGTAAACCTGGATCCA
GCAGCAGAACACTTCAACTACTCCGTGATGGCTGACATCCGGGAACTGATCGAGGTGGATGATGTAATGGAGGATGATTC
TCTGCGATTCGGTCCCAACGGAGGATTGGTATTTTGCATGGAGTACTTTGCCAATAATTTTGACTGGCTGGAGAACTGTC
TTGGCCATGTAGAGGACGACTATATCCTTTTTGATTGTCCAGGTCAGATTGAGTTGTACACTCACCTGCCTGTGATGAAA
CAGCTGGTCCAGCAGCTCGAGCAGTGGGAGTTCCGAGTCTGTGGAGTTTTTCTTGTTGATTCTCAGTTCATGGTGGAGTC
ATTCAAGTTTATTTCTGGCATCTTGGCAGCCCTGAGTGCCATGATCTCTCTAGAAATTCCGCAAGTCAACATCATGACAA
AAATGGATCTGCTGAGTAAAAAAGCAAAAAAGGAAATTGAGAAATTTTTAGATCCAGACATGTATTCTTTATTAGAAGAT
TCTACAAGTGACTTAAGAAGCAAAAAATTCAAGAAACTGACTAAAGCTATATGTGGACTGATTGATGACTACAGCATGGT
TCGATTTTTACCTTACGATCAGTCAGATGAAGAAAGCATGAACATTGTATTGCAGCATATTGATTTTGCCATTCAATATG
GAGAAGACCTAGAATTTAAAGAACCAAAGGAACGTGAAGATGAGTCTTCCTCTATGTTTGACGAATATTTTCAAGAATGC
CAGGATGAATGA
ATGCTCCCCAAAACAAGAGGTGCCTTCCACTTCAGTATTCCAGATCCTCAGCACATTTGCAAATCGCGAGGGTCACCATA
CAGGTCAAACGTCTGCACGCAAACCACGGACCGAAGCACGTGGCGCAAGGATGCGGAGCTTTATCTGTTGTCCGTTATTA
CTCAGAGCACCTACTGTGCCACCATGGTCCAGCACTGTGAAGCCCTCAACCGGTCTGTCCAAGTTGTAAACCTGGATCCA
GCAGCAGAACACTTCAACTACTCCGTGATGGCTGACATCCGGGAACTGATCGAGGTGGATGATGTAATGGAGGATGATTC
TCTGCGATTCGGTCCCAACGGAGGATTGGTATTTTGCATGGAGTACTTTGCCAATAATTTTGACTGGCTGGAGAACTGTC
TTGGCCATGTAGAGGACGACTATATCCTTTTTGATTGTCCAGGTCAGATTGAGTTGTACACTCACCTGCCTGTGATGAAA
CAGCTGGTCCAGCAGCTCGAGCAGTGGGAGTTCCGAGTCTGTGGAGTTTTTCTTGTTGATTCTCAGTTCATGGTGGAGTC
ATTCAAGTTTATTTCTGGCATCTTGGCAGCCCTGAGTGCCATGATCTCTCTAGAAATTCCGCAAGTCAACATCATGACAA
AAATGGATCTGCTGAGTAAAAAAGCAAAAAAGGAAATTGAGAAATTTTTAGATCCAGACATGTATTCTTTATTAGAAGAT
TCTACAAGTGACTTAAGAAGCAAAAAATTCAAGAAACTGACTAAAGCTATATGTGGACTGATTGATGACTACAGCATGGT
TCGATTTTTACCTTACGATCAGTCAGATGAAGAAAGCATGAACATTGTATTGCAGCATATTGATTTTGCCATTCAATATG
GAGAAGACCTAGAATTTAAAGAACCAAAGGAACGTGAAGATGAGTCTTCCTCTATGTTTGACGAATATTTTCAAGAATGC
CAGGATGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 19 .48 RPM |
| bodymap2_lung | 18 .72 RPM |
| bodymap2_breast | 21 .50 RPM |
| bodymap2_adipose | 15 .45 RPM |
| bodymap2_adrenal | 14 .55 RPM |
| bodymap2_skeletal_muscle | 25 .37 RPM |
| bodymap2_thyroid | 28 .89 RPM |
| bodymap2_prostate | 26 .85 RPM |
| bodymap2_colon | 22 .47 RPM |
| bodymap2_testis | 49 .13 RPM |
| bodymap2_brain | 16 .69 RPM |
| bodymap2_heart | 21 .40 RPM |
| bodymap2_white_blood_cells | 16 .18 RPM |
| bodymap2_lymph_node | 17 .98 RPM |
| bodymap2_ovary | 18 .16 RPM |
| bodymap2_kidney | 26 .20 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000009339 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000016646 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000001697 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015510 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006494 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002831 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_652 | 70.88 | 63.38 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000111231 retrocopies