Parental gene:

TFG, ENSG00000114354

Aliases:TFG, HMSNP, SPG57, TF6, TRKT3
Description:TRK-fused gene [Source:HGNC Symbol;Acc:11758]
Organism:Human (Homo sapiens)
Coordinates:3:100428204..100467810(+)


>ENSG00000114354
ATGAACGGACAGTTGGATCTAAGTGGGAAGCTAATCATCAAAGCTCAACTTGGGGAGGATATTCGGCGAATTCCTATTCA
TAATGAAGATATTACTTATGATGAATTAGTGCTAATGATGCAACGAGTTTTCAGAGGAAAACTTCTGAGTAATGATGAAG
TAACAATAAAGTATAAAGATGAAGATGGAGATCTTATAACAATTTTTGATAGTTCTGACCTTTCCTTTGCAATTCAGTGC
AGTAGGATACTGAAACTGACATTATTTGTTAATGGCCAGCCAAGACCCCTTGAATCAAGTCAGGTGAAATATCTCCGTCG
AGAACTGATAGAACTTCGAAATAAAGTGAATCGTTTATTGGATAGCTTGGAACCACCTGGAGAACCAGGACCTTCCACCA
ATATTCCTGAAAATGATACTGTGGATGGTAGGGAAGAAAAGTCTGCTTCTGATTCTTCTGGAAAACAGTCTACTCAGGTT
ATGGCAGCAAGTATGTCTGCTTTTGATCCTTTAAAAAACCAAGATGAAATCAATAAAAATGTTATGTCAGCGTTTGGCTT
AACAGATGATCAGGTTTCAGGGCCACCCAGTGCTCCTGCAGAAGATCGTTCAGGAACACCCGACAGCATTGCTTCCTCCT
CCTCAGCAGCTCACCCACCAGGCGTTCAGCCACAGCAGCCACCATATACAGGAGCTCAGACTCAAGCAGGTCAGATTGAA
GGTCAGATGTACCAACAGTACCAGCAACAGGCCGGCTATGGTGCACAGCAGCCGCAGGCTCCACCTCAGCAGCCTCAACA
GTATGGTATTCAGTATTCAGCAAGCTATAGTCAGCAGACTGGACCTCAACAACCTCAGCAGTTCCAGGGATATGGCCAGC
AACCAACTTCCCAGGCACCAGCTCCTGCCTTTTCTGGTCAGCCTCAACAACTGCCTGCTCAGCCGCCACAGCAGTACCAG
GCGAGCAATTATCCTGCACAAACTTACACTGCCCAAACTTCTCAGCCTACTAATTATACTGTGGCTCCTGCCTCTCAACC
TGGAATGGCTCCAAGCCAACCTGGGGCCTATCAACCAAGACCAGGTTTTACTTCACTTCCTGGAAGTACCATGACCCCTC
CTCCAAGTGGGCCTAATCCTTATGCGCGTAACCGTCCTCCCTTTGGTCAGGGCTATACCCAACCTGGACCTGGTTATCGA
TAA

Library Parental gene expression (RPM)
bodymap2_adipose 57 .17 RPM
bodymap2_adrenal 61 .65 RPM
bodymap2_brain 56 .80 RPM
bodymap2_breast 73 .44 RPM
bodymap2_colon 74 .56 RPM
bodymap2_heart 63 .93 RPM
bodymap2_kidney 102 .53 RPM
bodymap2_liver 85 .23 RPM
bodymap2_lung 75 .30 RPM
bodymap2_lymph_node 69 .39 RPM
bodymap2_ovary 86 .01 RPM
bodymap2_prostate 72 .97 RPM
bodymap2_skeletal_muscle 74 .21 RPM
bodymap2_testis 95 .45 RPM
bodymap2_thyroid 79 .43 RPM
bodymap2_white_blood_cells 47 .23 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013928 ortholog_one2one 1 retrogene
retro_chof_406,
Macaca mulatta ENSMMUG00000002863 ortholog_one2one 1 retrogene
retro_mmul_1760,
Nomascus leucogenys ENSNLEG00000002849 ortholog_one2one 1 retrogene
retro_nleu_2712,
Ochotona princeps ENSOPRG00000000781 ortholog_one2one 3 retrogenes
retro_opri_34, retro_opri_849, retro_opri_958,
Pongo abelii ENSPPYG00000013597 ortholog_one2one 1 retrogene
retro_pabe_2860,
Pan troglodytes ENSPTRG00000015165 ortholog_one2one 1 retrogene
retro_ptro_2345,
Pteropus vampyrus ENSPVAG00000017331 ortholog_one2one 1 retrogene
retro_pvam_1122,
Ictidomys tridecemlineatus ENSSTOG00000025779 ortholog_one2one 1 retrogene
retro_itri_457,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3459 83.55 95.25
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Download FASTA sequences of all ENSG00000114354 retrocopies