Parental gene: | TFG, ENSOPRG00000000781 |
| Aliases: | None |
| Description: | TRK-fused gene [Source:HGNC Symbol;Acc:11758] |
| Organism: | Southern American pika (Ochotona princeps) |
| Coordinates: | GeneScaffold_2719:77255..107894(+) |
>ENSOPRG00000000781
ATGAATGGACAGTTGGATCTAAGCGGGAAGTTAATCATCAAAGCTCAACTTGGGGAGGATATTCGACGAATTCCCATTCA
TAATGAAGATATTACTTATGATGAGTTAGTGCTAATGATGCAACGAGTTTTCAGAGGAAAACTTCTGAGTAATGATGAAG
TTACAATAAAGTATAAAGATGAAGATGGAGATCTTATCACAATTTTTGATAGTTCTGACCTTTCCTTTGCAATTCAGTGT
AGTAGGATACTGAAACTGACATTATTTGTTAATGGGCAACCCAGACCCCTTGAATCAAGTCAGGTGAAATACCTTCGTCG
AGAACTGATAGAGCTTCGAAATAAAGTGAACCGCTTGTTGAATAGCCTTGGACCCCCTGGAAGACCGGGGCCTTCCACTG
GTATCCTGGAAATTGATGCTGTGGATGGGAGAGAAGAAAAACCTGCTGCCTCTGATGCTTCTGGAAAGCAGTCGACTCAG
GTTATGGCAGCAAGTATGTCAGCTTTTGACCCTTTGAAAAACCAAGATGAAATCAGTAAAAATGTCATGTCAGCTTTTGG
CTTAACTGATGATCAGGTTTCAGGGCCACCCAGTGCGCCTGCCGAAGACCGATCAGGCACTCCTGACAGCATTGCATCCT
CCTCTTCAGCAGCTCACCCACCAGGAGTTCAGCCACAGCAGCCACCCTACACAGGAACTCAGACACAAGCAGGTCAGAGT
GAAGGTCAGCTGTACCAACAGTACCAACAACAGGCTGGTTATGGTGCACAGCAGCCCCAGGCTCCTCCTCAGCCACCTCA
GCAGTATGGTGTGCAGTATTCAGCCAGTTACAGTCAGCAGACCGGACCCCAGCAACCTCAGCAGTTCCAGGGCTATGGCC
AACAACCAACTTCCCAGGCACCAGCTCCTGCCTTTTCTGGTCAGCCTCAACAACTGCCTGCCCAGCCGCCACAGCAGTAC
CAGGCGAGCAATTATCCTCCACAAACATACACTACCCAAACGTCTCAGCCTGCTAATTACACTGTGGCCCCGGCCTGTCA
ACCTGGAATGGCTCCAAGCCAACCTGGGGCCTATCAACCAAGACCAGGTTTTACTTCACCTCCTGGAAGTACTGTGGCCC
CTCCTCCAAGTGGGCCTAACCCGTATGCACGTACCCGTCCTCCCTTTGGTCAGGGCTATACCCAGCCTGGACCTGGTTAT
CGATAA
ATGAATGGACAGTTGGATCTAAGCGGGAAGTTAATCATCAAAGCTCAACTTGGGGAGGATATTCGACGAATTCCCATTCA
TAATGAAGATATTACTTATGATGAGTTAGTGCTAATGATGCAACGAGTTTTCAGAGGAAAACTTCTGAGTAATGATGAAG
TTACAATAAAGTATAAAGATGAAGATGGAGATCTTATCACAATTTTTGATAGTTCTGACCTTTCCTTTGCAATTCAGTGT
AGTAGGATACTGAAACTGACATTATTTGTTAATGGGCAACCCAGACCCCTTGAATCAAGTCAGGTGAAATACCTTCGTCG
AGAACTGATAGAGCTTCGAAATAAAGTGAACCGCTTGTTGAATAGCCTTGGACCCCCTGGAAGACCGGGGCCTTCCACTG
GTATCCTGGAAATTGATGCTGTGGATGGGAGAGAAGAAAAACCTGCTGCCTCTGATGCTTCTGGAAAGCAGTCGACTCAG
GTTATGGCAGCAAGTATGTCAGCTTTTGACCCTTTGAAAAACCAAGATGAAATCAGTAAAAATGTCATGTCAGCTTTTGG
CTTAACTGATGATCAGGTTTCAGGGCCACCCAGTGCGCCTGCCGAAGACCGATCAGGCACTCCTGACAGCATTGCATCCT
CCTCTTCAGCAGCTCACCCACCAGGAGTTCAGCCACAGCAGCCACCCTACACAGGAACTCAGACACAAGCAGGTCAGAGT
GAAGGTCAGCTGTACCAACAGTACCAACAACAGGCTGGTTATGGTGCACAGCAGCCCCAGGCTCCTCCTCAGCCACCTCA
GCAGTATGGTGTGCAGTATTCAGCCAGTTACAGTCAGCAGACCGGACCCCAGCAACCTCAGCAGTTCCAGGGCTATGGCC
AACAACCAACTTCCCAGGCACCAGCTCCTGCCTTTTCTGGTCAGCCTCAACAACTGCCTGCCCAGCCGCCACAGCAGTAC
CAGGCGAGCAATTATCCTCCACAAACATACACTACCCAAACGTCTCAGCCTGCTAATTACACTGTGGCCCCGGCCTGTCA
ACCTGGAATGGCTCCAAGCCAACCTGGGGCCTATCAACCAAGACCAGGTTTTACTTCACCTCCTGGAAGTACTGTGGCCC
CTCCTCCAAGTGGGCCTAACCCGTATGCACGTACCCGTCCTCCCTTTGGTCAGGGCTATACCCAGCCTGGACCTGGTTAT
CGATAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013928 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000114354 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000002863 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002849 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000013597 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000015165 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000017331 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000025779 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_opri_34 | 69.42 | 51.12 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_opri_849 | 69.42 | 51.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_opri_958 | 69.42 | 51.12 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOPRG00000000781 retrocopies