Parental gene:

TXNDC9, ENSG00000115514

Aliases:TXNDC9, APACD, PHLP3
Description:thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:24110]
Organism:Human (Homo sapiens)
Coordinates:2:99935444..99957165(-)


>ENSG00000115514
ATGGAAGCTGATGCATCTGTTGACATGTTTTCCAAAGTCCTGGAGCATCAGCTGCTTCAGACTACCAAACTGGTGGAAGA
ACATTTGGATTCTGAAATTCAAAAACTGGATCAGATGGATGAGGATGAATTGGAACGCCTTAAAGAAAAGAGACTCCAGG
CACTAAGGAAAGCTCAACAGCAGAAACAAGAATGGCTTTCTAAAGGACATGGGGAATACAGAGAAATCCCTAGTGAAAGA
GACTTTTTTCAAGAAGTCAAGGAGAGTGAAAATGTGGTTTGCCATTTCTACAGAGACTCCACATTCAGGTGTAAAATACT
AGACAGACATCTGGCAATATTGTCCAAGAAACACCTCGAGACCAAATTTTTGAAGCTGAATGTGGAAAAAGCACCTTTCC
TTTGTGAGAGACTGCATATCAAAGTCATTCCCACACTAGCACTGCTAAAAGATGGGAAAACACAAGATTATGTTGTTGGG
TTTACTGACCTAGGAAATACAGATGACTTCACCACAGAAACTTTAGAATGGAGGCTCGGTTCTTCTGACATTCTTAATTA
CAGTGGAAATTTAATGGAGCCACCATTTCAGAACCAAAAGAAATTTGGAACAAACTTCACAAAGCTGGAAAAGAAAACTA
TCCGAGGAAAGAAATATGATTCAGACTCTGATGATGATTAG

Library Parental gene expression (RPM)
bodymap2_liver 15 .63 RPM
bodymap2_lung 14 .91 RPM
bodymap2_breast 24 .28 RPM
bodymap2_adipose 15 .76 RPM
bodymap2_adrenal 25 .22 RPM
bodymap2_skeletal_muscle 14 .48 RPM
bodymap2_thyroid 20 .38 RPM
bodymap2_prostate 15 .21 RPM
bodymap2_colon 13 .75 RPM
bodymap2_testis 25 .66 RPM
bodymap2_brain 17 .67 RPM
bodymap2_heart 18 .83 RPM
bodymap2_white_blood_cells 31 .24 RPM
bodymap2_lymph_node 12 .33 RPM
bodymap2_ovary 25 .16 RPM
bodymap2_kidney 39 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000009936 ortholog_one2one 1 retrogene
retro_cjac_500,
Dipodomys ordii ENSDORG00000013557 ortholog_one2one 1 retrogene
retro_dord_141,
Gorilla gorilla ENSGGOG00000024615 ortholog_one2one 1 retrogene
retro_ggor_2096,
Myotis lucifugus ENSMLUG00000008110 ortholog_one2one 1 retrogene
retro_mluc_717,
Mus musculus ENSMUSG00000058407 ortholog_one2one 2 retrogenes
retro_mmus_2791, retro_mmus_873,
Pan troglodytes ENSPTRG00000012278 ortholog_one2one 1 retrogene
retro_ptro_1996,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3042 93.09 100.00
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Download FASTA sequences of all ENSG00000115514 retrocopies