Parental gene: | SYF2, ENSG00000117614 |
| Aliases: | None |
| Description: | SYF2 homolog, RNA splicing factor (S. cerevisiae) [Source:HGNC Symbol;Acc:19824] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 1:25549169..25558993(-) |
>ENSG00000117614
ATGGCGGCTATAGCTGCATCCGAGGTGCTGGTGGACAGCGCGGAGGAGGGGTCCCTCGCTGCGGCGGCGGAGCTGGCCGC
TCAGAAGCGCGAACAGAGACTGCGCAAATTCCGGGAGCTGCACCTGATGCGGAATGAAGCTCGTAAATTAAATCACCAGG
AAGTTGTGGAAGAAGATAAAAGACTAAAATTACCTGCAAATTGGGAAGCCAAAAAAGCTCGTTTGGAGTGGGAACTAAAG
GAAGAGGAAAAGAAAAAGGAATGTGCGGCAAGAGGAGAAGACTATGAGAAAGTGAAGTTGCTGGAGATCAGTGCAGAAGA
TGCAGAAAGATGGGAGAGGAAAAAGAAGAGGAAAAACCCTGATCTGGGATTTTCAGATTATGCTGCTGCCCAGTTACGCC
AGTATCATCGGTTGACCAAGCAGATCAAACCTGACATGGAAACATATGAGAGACTGAGAGAAAAACATGGAGAAGAGTTT
TTCCCAACATCCAATAGTCTTCTTCATGGAACACATGTGCCTTCCACAGAGGAAATTGACAGGATGGTCATAGATCTGGA
AAAACAGATTGAAAAACGAGACAAATATAGCCGGAGACGTCCTTATAATGATGATGCAGATATCGACTACATTAATGAAA
GGAATGCCAAATTCAACAAGAAAGCTGAAAGATTCTATGGGAAATACACAGCTGAAATTAAACAGAATTTGGAAAGAGGA
ACAGCTGTCTAA
ATGGCGGCTATAGCTGCATCCGAGGTGCTGGTGGACAGCGCGGAGGAGGGGTCCCTCGCTGCGGCGGCGGAGCTGGCCGC
TCAGAAGCGCGAACAGAGACTGCGCAAATTCCGGGAGCTGCACCTGATGCGGAATGAAGCTCGTAAATTAAATCACCAGG
AAGTTGTGGAAGAAGATAAAAGACTAAAATTACCTGCAAATTGGGAAGCCAAAAAAGCTCGTTTGGAGTGGGAACTAAAG
GAAGAGGAAAAGAAAAAGGAATGTGCGGCAAGAGGAGAAGACTATGAGAAAGTGAAGTTGCTGGAGATCAGTGCAGAAGA
TGCAGAAAGATGGGAGAGGAAAAAGAAGAGGAAAAACCCTGATCTGGGATTTTCAGATTATGCTGCTGCCCAGTTACGCC
AGTATCATCGGTTGACCAAGCAGATCAAACCTGACATGGAAACATATGAGAGACTGAGAGAAAAACATGGAGAAGAGTTT
TTCCCAACATCCAATAGTCTTCTTCATGGAACACATGTGCCTTCCACAGAGGAAATTGACAGGATGGTCATAGATCTGGA
AAAACAGATTGAAAAACGAGACAAATATAGCCGGAGACGTCCTTATAATGATGATGCAGATATCGACTACATTAATGAAA
GGAATGCCAAATTCAACAAGAAAGCTGAAAGATTCTATGGGAAATACACAGCTGAAATTAAACAGAATTTGGAAAGAGGA
ACAGCTGTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 17 .32 RPM |
| bodymap2_lung | 38 .38 RPM |
| bodymap2_breast | 46 .54 RPM |
| bodymap2_adipose | 63 .53 RPM |
| bodymap2_adrenal | 53 .61 RPM |
| bodymap2_skeletal_muscle | 47 .38 RPM |
| bodymap2_thyroid | 85 .64 RPM |
| bodymap2_prostate | 72 .35 RPM |
| bodymap2_colon | 107 .86 RPM |
| bodymap2_testis | 71 .10 RPM |
| bodymap2_brain | 37 .18 RPM |
| bodymap2_heart | 25 .61 RPM |
| bodymap2_white_blood_cells | 64 .64 RPM |
| bodymap2_lymph_node | 41 .83 RPM |
| bodymap2_ovary | 61 .59 RPM |
| bodymap2_kidney | 48 .41 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000010115 | possible_ortholog | 1 retrogene | |
| Bos taurus | ENSBTAG00000001651 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000005273 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000018559 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000013951 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000013050 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000007152 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_4152 | 54.74 | 56.38 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000117614 retrocopies