Parental gene:

HNRNPR, ENSG00000125944

Aliases:HNRNPR, HNRPR, hnRNP R, hnRNP-R
Description:heterogeneous nuclear ribonucleoprotein R [Source:HGNC Symbol;Acc:5047]
Organism:Human (Homo sapiens)
Coordinates:1:23630263..23670829(-)


>ENSG00000125944
ATGGCTAATCAGGTGAATGGTAATGCGGTACAGTTAAAAGAAGAGGAAGAACCAATGGATACTTCCAGTGTAACTCACAC
AGAACACTACAAGACACTGATAGAGGCAGGCCTCCCACAGAAGGTGGCAGAAAGACTTGATGAAATATTTCAGACAGGAT
TGGTAGCTTATGTCGATCTTGATGAAAGAGCAATTGATGCTCTCAGGGAATTTAATGAAGAAGGAGCTCTGTCTGTACTA
CAGCAGTTCAAGGAAAGTGACTTATCACATGTTCAGAACAAAAGTGCATTTTTATGTGGAGTTATGAAGACCTACAGGCA
GAGAGAGAAACAGGGGAGCAAGGTGCAAGAGTCCACAAAGGGACCTGATGAAGCGAAGATCAAGGCCTTGCTTGAGAGAA
CTGGTTATACTCTGGATGTAACCACAGGACAGAGGAAGTATGGTGGTCCTCCACCAGACAGTGTGTACTCTGGCGTGCAA
CCTGGAATTGGAACGGAGGTATTTGTAGGCAAAATACCAAGGGATTTATATGAGGATGAGTTGGTGCCCCTTTTTGAGAA
GGCCGGACCCATTTGGGATCTACGTCTTATGATGGATCCACTGTCCGGTCAGAATAGAGGGTATGCATTTATCACCTTCT
GTGGAAAGGAAGCTGCACAGGAAGCCGTGAAACTGTGTGACAGCTATGAAATTCGCCCTGGTAAACACCTTGGAGTGTGC
ATTTCTGTGGCAAACAACAGACTTTTTGTTGGATCCATTCCGAAGAATAAGACTAAAGAAAACATTTTGGAAGAATTCAG
TAAAGTCACAGGTTTAACAGAGGGTTTGGTGGACGTTATTCTCTATCATCAACCCGATGACAAAAAGAAGAATCGGGGGT
TCTGCTTCCTTGAATATGAGGATCACAAGTCAGCAGCACAAGCCAGACGCCGGCTGATGAGTGGAAAAGTAAAAGTGTGG
GGAAATGTAGTTACAGTTGAATGGGCTGACCCTGTGGAAGAACCAGATCCAGAAGTCATGGCTAAGGTAAAAGTTTTGTT
TGTGAGAAACTTGGCTACTACGGTGACAGAAGAAATATTGGAAAAGTCATTTTCTGAATTTGGAAAACTCGAAAGAGTAA
AGAAGTTGAAAGATTATGCATTTGTTCATTTTGAAGACAGAGGAGCAGCTGTTAAGGCTATGGATGAAATGAATGGCAAA
GAAATAGAAGGGGAAGAAATTGAAATAGTCTTAGCCAAGCCACCAGACAAGAAAAGGAAAGAGCGCCAAGCTGCTAGACA
GGCCTCCAGAAGCACTGCGTATGAAGATTATTACTACCACCCTCCTCCTCGCATGCCACCTCCAATTAGAGGTCGGGGTC
GTGGTGGGGGGAGAGGTGGATATGGCTACCCTCCAGATTACTACGGCTATGAAGATTACTATGATGATTACTATGGTTAT
GATTATCACGACTATCGTGGAGGCTATGAAGATCCCTACTACGGCTATGATGATGGCTATGCAGTAAGAGGAAGAGGAGG
AGGAAGGGGAGGGCGAGGTGCTCCACCACCACCAAGGGGGAGGGGAGCACCACCTCCAAGAGGTAGAGCTGGCTATTCAC
AGAGGGGGGCACCTTTGGGACCACCAAGAGGCTCTAGGGGTGGCAGAGGGGGTCCTGCTCAACAGCAGAGAGGCCGTGGT
TCCCGTGGATCTCGGGGCAATCGTGGGGGCAATGTAGGAGGCAAGAGAAAGGCAGATGGGTACAACCAGCCTGATTCCAA
GCGTCGTCAGACCAACAACCAACAGAACTGGGGTTCCCAACCCATCGCTCAGCAGCCGCTTCAGCAAGGTGGTGACTATT
CTGGTAACTATGGTTACAATAATGACAACCAGGAATTTTATCAGGATACTTATGGGCAACAGTGGAAGTAG

Library Parental gene expression (RPM)
bodymap2_liver 52 .87 RPM
bodymap2_lung 164 .01 RPM
bodymap2_breast 88 .87 RPM
bodymap2_adipose 141 .19 RPM
bodymap2_adrenal 198 .43 RPM
bodymap2_skeletal_muscle 73 .42 RPM
bodymap2_thyroid 250 .53 RPM
bodymap2_prostate 132 .46 RPM
bodymap2_colon 144 .19 RPM
bodymap2_testis 173 .15 RPM
bodymap2_brain 153 .39 RPM
bodymap2_heart 71 .02 RPM
bodymap2_white_blood_cells 179 .04 RPM
bodymap2_lymph_node 137 .34 RPM
bodymap2_ovary 251 .58 RPM
bodymap2_kidney 112 .85 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000135316 within_species_paralog 1 retrogene
retro_hsap_2410,
Homo sapiens ENSG00000256453 within_species_paralog 1 retrogene
retro_hsap_1760,
Gorilla gorilla ENSGGOG00000013250 ortholog_one2one 1 retrogene
retro_ggor_568,
Macaca mulatta ENSMMUG00000010970 ortholog_one2one 1 retrogene
retro_mmul_2433,
Monodelphis domestica ENSMODG00000016144 ortholog_one2one 1 retrogene
retro_mdom_240,
Mus musculus ENSMUSG00000066037 ortholog_one2one 1 retrogene
retro_mmus_458,
Otolemur garnettii ENSOGAG00000009179 possible_ortholog 1 retrogene
retro_ogar_3144,
Procavia capensis ENSPCAG00000010462 ortholog_one2one 1 retrogene
retro_pcap_88,
Pan troglodytes ENSPTRG00000000324 ortholog_one2one 1 retrogene
retro_ptro_474,
Tupaia belangeri ENSTBEG00000002251 ortholog_one2one 1 retrogene
retro_tbel_4256,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_651 83.38 50.79
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Download FASTA sequences of all ENSG00000125944 retrocopies