Parental gene:

HNRNPR, ENSMODG00000016144

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein R [Source:HGNC Symbol;Acc:5047]
Organism:Opossum (Monodelphis domestica)
Coordinates:4:354369792..354398219(+)


>ENSMODG00000016144
GAGGGGGTGGCGCGCGCGCCATTTCTAGTCGTTTTCAAAGAGCCTCGCGCTCGTTCTCTCGGGCCCCCATCGCCGTTTTT
CCAGCAGCATAATAAAATGGCTAATCAGGTGAATGGTAATGCGGTACAGTTAAAAGAAGAGGAAGAACCAATGGACACTT
CCAGTGTAACTCACACAGAGCACTACAAGACACTGATAGAGGCAGGCCTCCCACAGAAGGTGGCAGAGAGACTTGATGAA
ATATTTCAGACAGGGCTGGTAGCTTATGTCGATCTTGATGAAAGAGCAATTGATGCTCTCAGAGAATTTAATGAAGAAGG
CGCCCTCTCTGTGCTTCAACAATTTAAAGAAAGCGACCTGTCTCATGTGCAGAACAAAAGTGCATTTTTATGTGGAGTTA
TGAAGACCTACAGGCAAAGGGAGAAACAAGGGAGCAAGGTACAAGAATCAACAAAGGGACCTGATGAAGCAAAGATTAAG
GCTTTGCTCGAGAGGACTGGTTACACACTAGATGTAACCACAGGACAGAGGAAATATGGCGGACCTCCTCCAGACAGTGT
ATATTCTGGTGTGCAACCTGGCATTGGGACAGAGGTTTTTGTAGGTAAGATACCAAGAGATTTATATGAAGATGAGCTGG
TACCACTGTTTGAAAAGGCTGGTCCCATTTGGGACTTACGCCTTATGATGGATCCTCTGTCTGGTCAGAACAGAGGGTAT
GCATTCATCACCTTCTGTGGAAAGGATGCCGCACAGGAAGCTGTCAAGCTGTGTGACAGCTATGAAATCCGTCCGGGTAA
ACACCTTGGAGTCTGCATCTCAGTGGCAAACAACAGGCTGTTTGTTGGATCAATTCCAAAGAACAAAACCAAGGAAAACA
TATTGGAAGAATTCAGCAAAGTCACAGGTTTAACAGAGGGTTTGGTGGACGTTATTCTCTATCATCAACCCGATGATAAA
AAGAAGAATCGGGGGTTCTGCTTCCTTGAGTATGAAGACCACAAGTCGGCAGCACAAGCCCGGCGCAGGCTTATGAGCGG
GAAAGTCAAAGTCTGGGGCAATGTTGTGACCGTGGAGTGGGCCGACCCTGTGGAAGAACCAGACCCGGAGGTTATGGCCA
AGGTGAAAGTTCTGTTTGTGAGAAACTTGGCCACTACAGTGACAGAGGAAATATTGGAGAAATCCTTTTCTGAATTTGGA
AAGCTAGAAAGAGTGAAGAAGCTAAAAGATTATGCATTTGTTCACTTTGAAGACAGAGGAGCAGCAGTTAAGGCCATGGA
TGAGATGAATGGGAAAGAAATAGAGGGGGAAGAAATTGAGATAGTCTTAGCCAAGCCTCCTGACAAGAAAAGGAAAGAAC
GCCAGGCTGCAAGACAGGCCTCCAGAAGCACTGCGTATGAAGATTATTACTACCATCCCCCACCTCGTATGCCACCTCCT
TTGAGAGGCCGAGGACGTGGTGGGGGGAGAGGCGGCTATGGTTACCCTCCAGATTACTATGGCTATGAAGATTATTATGA
TGACTACTATGGCTATGATTATCATGATTATCGTGGAGGCTATGAAGACCCATACTATGGCTATGATGATGGCTATGCAG
TAAGAGGAAGAGGAGGAGGAAGGGGTGGGCGCGGTGCTCCGCCACCACCACGGGGGCGTGGAGCACCACCTCCACGAGGT
AGAGCTGGCTATTCACAGAGGGGGGCACCTTTGGGACCGCCAAGAGGAGCTCGGGGCGGGAGAGGGGGCCCTGCACAGCC
ACAGAGAGGCCGTGGTTCGCGTGGAGCTCGGGGTAACCGTGGGGGCAACGTAGGAGGCAAGAGAAAAGCCGATGGGTACA
ACCAGCCCGACTCCAAGCGCCGTCAGACCAACAGCCAGCAGAACTGGGGCTCCCAGCCCATCGCCCAGCAGCCGCTTCAG
CAAGGTGGCGACTATTCTGGTAACTATGGCTACAATAATGACAACCAGGAATTTTATCAGGATACTTATGGGCAACAGTG
GAAATGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000125944 ortholog_one2one 1 retrogene
retro_hsap_651,
Gorilla gorilla ENSGGOG00000013250 ortholog_one2one 1 retrogene
retro_ggor_568,
Macaca mulatta ENSMMUG00000010970 ortholog_one2one 1 retrogene
retro_mmul_2433,
Monodelphis domestica ENSMODG00000007003 within_species_paralog 1 retrogene
retro_mdom_39,
Mus musculus ENSMUSG00000066037 ortholog_one2one 1 retrogene
retro_mmus_458,
Otolemur garnettii ENSOGAG00000009179 ortholog_one2many 1 retrogene
retro_ogar_3144,
Procavia capensis ENSPCAG00000010462 ortholog_one2one 1 retrogene
retro_pcap_88,
Pan troglodytes ENSPTRG00000000324 ortholog_one2one 1 retrogene
retro_ptro_474,
Tupaia belangeri ENSTBEG00000002251 ortholog_one2one 1 retrogene
retro_tbel_4256,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_240 81.64 82.04
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Download FASTA sequences of all ENSMODG00000016144 retrocopies