Parental gene:

VPS25, ENSG00000131475

Aliases:VPS25, DERP9, EAP20, FAP20
Description:vacuolar protein sorting 25 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:28122]
Organism:Human (Homo sapiens)
Coordinates:17:40925453..40931617(+)


>ENSG00000131475
ATGGCGATGAGTTTCGAGTGGCCGTGGCAGTATCGCTTCCCACCCTTCTTTACGTTACAACCGAATGTGGACACTCGGCA
GAAGCAGCTGGCCGCCTGGTGCTCGCTGGTCCTGTCCTTCTGCCGCCTGCACAAACAGTCCAGCATGACGGTGATGGAAG
CTCAGGAGAGCCCGCTCTTCAACAACGTCAAGCTACAGCGAAAGCTTCCTGTGGAGTCGATCCAGATTGTATTAGAGGAA
CTGAGGAAGAAAGGGAACCTCGAGTGGTTGGATAAGAGCAAGTCCAGCTTCCTGATCATGTGGCGGAGGCCAGAAGAATG
GGGGAAACTCATCTATCAGTGGGTTTCCAGGAGTGGCCAGAACAACTCCGTCTTTACCCTGTATGAACTGACTAATGGGG
AAGACACAGAGGATGAGGAGTTCCACGGGCTGGATGAAGCCACTCTACTGCGGGCTCTGCAGGCCCTACAGCAGGAGCAC
AAGGCCGAGATCATCACTGTCAGCGATGGCCGAGGCGTCAAGTTCTTCTAG

Library Parental gene expression (RPM)
bodymap2_liver 23 .66 RPM
bodymap2_lung 11 .76 RPM
bodymap2_breast 14 .55 RPM
bodymap2_adipose 13 .78 RPM
bodymap2_adrenal 21 .53 RPM
bodymap2_skeletal_muscle 11 .42 RPM
bodymap2_thyroid 22 .45 RPM
bodymap2_prostate 19 .92 RPM
bodymap2_colon 10 .92 RPM
bodymap2_testis 18 .99 RPM
bodymap2_brain 8 .20 RPM
bodymap2_heart 8 .62 RPM
bodymap2_white_blood_cells 22 .88 RPM
bodymap2_lymph_node 12 .61 RPM
bodymap2_ovary 20 .61 RPM
bodymap2_kidney 35 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000013276 ortholog_one2one 1 retrogene
retro_cjac_2959,
Gorilla gorilla ENSGGOG00000016041 ortholog_one2one 1 retrogene
retro_ggor_284,
Macropus eugenii ENSMEUG00000011611 ortholog_one2one 2 retrogenes
retro_meug_1247, retro_meug_1681,
Macaca mulatta ENSMMUG00000002149 ortholog_one2one 1 retrogene
retro_mmul_406,
Nomascus leucogenys ENSNLEG00000011797 ortholog_one2one 1 retrogene
retro_nleu_1862,
Ochotona princeps ENSOPRG00000012574 ortholog_one2one 1 retrogene
retro_opri_1071,
Pongo abelii ENSPPYG00000008377 ortholog_one2one 1 retrogene
retro_pabe_427,
Pan troglodytes ENSPTRG00000009220 ortholog_one2one 2 retrogenes
retro_ptro_1624, retro_ptro_334,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_213 77.70 83.52
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Download FASTA sequences of all ENSG00000131475 retrocopies