Parental gene:

VPS25, ENSMMUG00000002149

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:16:52895534..52901408(+)


>ENSMMUG00000002149
ATGGCGATGAGTTTCGAGTGGCCGTGGCAGTATCGCTTCCCACCCTTCTTTACGTTACAACCGAATGTGGACACTCGGCA
GAAGCAGCTGGCCGCCTGGTGCTCGCTGGTCCTGTCCTTCTGCCGCCTGCACAAACAGTCCAGCATGACGGTGATGGAAG
CTCAGGAGAGCCCGCTCTTCAACAACGTCAAGCTACAGCGAAAGCTTCCTGTGGAGTCGATCCAGATTGTATTAGAGGAA
CTGAGGAAGAAAGGGAACCTCGAGTGGTTGGATAAGAGCAAGTCTAGCTTCCTGATCATGTGGCGGAGGCCAGAAGAATG
GGGGAAACTCATCTATCAGTGGGTTTCCAGGAGTGGCCAGAACAACTCCGTCTTTACCCTGTATGAACTAACTAACGGGG
AAGACACAGAGGATGAGGAGTTCCATGGGCTGGATGAGGCCACTCTACTGCGGGCTCTGCAGGCACTACAGCAGGAACAC
AAGGCCGAGATCATCACCGTCAGCGATGGCCGAGGCGTCAAGTTCTTCTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 19 .36 RPM
SRP007412_brain 15 .24 RPM
SRP007412_cerebellum 14 .66 RPM
SRP007412_heart 13 .66 RPM
SRP007412_kidney 37 .79 RPM
SRP007412_liver 36 .73 RPM
SRP007412_testis 17 .60 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000013276 ortholog_one2one 1 retrogene
retro_cjac_2959,
Homo sapiens ENSG00000131475 ortholog_one2one 1 retrogene
retro_hsap_213,
Gorilla gorilla ENSGGOG00000016041 ortholog_one2one 1 retrogene
retro_ggor_284,
Macropus eugenii ENSMEUG00000011611 ortholog_one2one 2 retrogenes
retro_meug_1247, retro_meug_1681,
Nomascus leucogenys ENSNLEG00000011797 ortholog_one2one 1 retrogene
retro_nleu_1862,
Ochotona princeps ENSOPRG00000012574 ortholog_one2one 1 retrogene
retro_opri_1071,
Pongo abelii ENSPPYG00000008377 ortholog_one2one 1 retrogene
retro_pabe_427,
Pan troglodytes ENSPTRG00000009220 ortholog_one2one 2 retrogenes
retro_ptro_1624, retro_ptro_334,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_406 71.43 83.52
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Download FASTA sequences of all ENSMMUG00000002149 retrocopies