Parental gene:

VPS25, ENSPTRG00000009220

Aliases:None
Description:Pan troglodytes vacuolar protein sorting 25 homolog (S. cerevisiae) (VPS25), mRNA. [Source:RefSeq mRNA;Acc:NM_001252014]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:17:14604358..14610543(-)


>ENSPTRG00000009220
ATGGCGATGAGTTTCGAGTGGCCGTGGCAGTATCGCTTCCCACCCTTCTTTACGTTACAACCGAATGTGGACACTCGGCA
GAAGCAGCTGGCCGCCTGGTGCTCGCTGGTCCTGTCCTTCTGCCGCCTGCACAAACAGTCCAGCATGACGGTGATGGAAG
CTCAGGAGAGCCCGCTCTTCAACAACGTCAAGCTACAGCGAAAGCTTCCTGTGGAGTCGATCCAGATTGTATTAGAGGAA
CTGAGGAAGAAAGGGAACCTCGAGTGGTTGGATAAGAGCAAGTCCAGCTTCCTGATCATGTGGCGGAGGCCAGAAGAATG
GGGGAAACTCATCTATCAGTGGGTTTCCAGGAGTGGCCAGAACAACTCCGTCTTTACCCTGTATGAACTGACTAATGGGG
AAGACACAGAGGATGAGGAGTTCCATGGGCTGGATGAAGCCACTCTACTGCGGGCTCTGCAGGCCCTACAGCAGGAGCAC
AAGGCCGAGATCATCACCGTCAGCGATGGCCGAGGTGTCAAGTTCTTCTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 5 .77 RPM
SRP007412_cerebellum 3 .84 RPM
SRP007412_heart 2 .89 RPM
SRP007412_kidney 9 .91 RPM
SRP007412_liver 5 .92 RPM
SRP007412_testis 3 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000013276 ortholog_one2one 1 retrogene
retro_cjac_2959,
Homo sapiens ENSG00000131475 ortholog_one2one 1 retrogene
retro_hsap_213,
Gorilla gorilla ENSGGOG00000016041 ortholog_one2one 1 retrogene
retro_ggor_284,
Macropus eugenii ENSMEUG00000011611 ortholog_one2one 2 retrogenes
retro_meug_1247, retro_meug_1681,
Macaca mulatta ENSMMUG00000002149 ortholog_one2one 1 retrogene
retro_mmul_406,
Nomascus leucogenys ENSNLEG00000011797 ortholog_one2one 1 retrogene
retro_nleu_1862,
Ochotona princeps ENSOPRG00000012574 ortholog_one2one 1 retrogene
retro_opri_1071,
Pongo abelii ENSPPYG00000008377 ortholog_one2one 1 retrogene
retro_pabe_427,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_334 79.05 83.52
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2. retro_ptro_1624 99.43 100.00
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Download FASTA sequences of all ENSPTRG00000009220 retrocopies