Parental gene: | ACTR3B, ENSG00000133627 |
| Aliases: | ACTR3B, ARP11, ARP3BETA |
| Description: | ARP3 actin-related protein 3 homolog B (yeast) [Source:HGNC Symbol;Acc:17256] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 7:152456833..152552463(+) |
>ENSG00000133627
ATGGCAGGCTCCCTGCCTCCCTGCGTGGTGGACTGTGGCACCGGGTATACCAAGCTTGGCTACGCAGGCAACACTGAGCC
CCAGTTCATTATTCCTTCATGTATTGCCATCAGAGAGTCAGCAAAGGTAGTTGACCAAGCTCAAAGGAGAGTGTTGAGGG
GAGTTGATGACCTTGACTTTTTCATAGGAGATGAAGCCATCGATAAACCTACATATGCTACAAAGTGGCCGATACGACAT
GGAATCATTGAAGACTGGGATCTTATGGAAAGGTTCATGGAGCAAGTGGTTTTTAAATATCTTCGAGCTGAACCTGAGGA
CCATTATTTTTTAATGACAGAACCTCCACTCAATACACCAGAAAACAGAGAGTATCTTGCAGAAATTATGTTTGAATCAT
TTAACGTACCAGGACTCTACATTGCAGTTCAGGCAGTGCTGGCCTTGGCGGCATCTTGGACATCTCGACAAGTGGGTGAA
CGTACGTTAACGGGGATAGTCATTGACAGCGGAGATGGAGTCACCCATGTTATCCCAGTGGCAGAAGGTTATGTAATTGG
AAGCTGCATCAAACACATCCCGATTGCAGGTAGAGATATTACGTATTTCATTCAACAGCTGCTAAGGGAGAGGGAGGTGG
GAATCCCTCCTGAGCAGTCACTGGAGACCGCAAAAGCCATTAAGGAGAAATACTGTTACATTTGCCCCGATATAGTCAAG
GAATTTGCCAAGTATGATGTGGATCCCCGGAAGTGGATCAAACAGTACACGGGTATCAATGCGATCAACCAGAAGAAGTT
TGTTATAGACGTTGGTTACGAAAGATTCCTGGGACCTGAAATATTCTTTCACCCGGAGTTTGCCAACCCAGACTTTATGG
AGTCCATCTCAGATGTTGTTGATGAAGTAATACAGAACTGCCCCATCGATGTGCGGCGCCCGCTGTATAAGAATGTCGTA
CTCTCAGGAGGCTCCACCATGTTCAGGGATTTCGGACGCCGACTGCAGAGGGATTTGAAGAGAGTGGTGGATGCTAGGCT
GAGGCTCAGCGAGGAGCTCAGCGGCGGGAGGATCAAGCCGAAGCCTGTGGAGGTCCAGGTGGTCACGCATCACATGCAGC
GCTACGCCGTGTGGTTCGGAGGCTCCATGCTGGCCTCGACTCCCGAGTTCTTTCAGGTCTGCCACACCAAGAAGGACTAT
GAAGAGTACGGGCCCAGCATCTGCCGCCACAACCCCGTCTTTGGAGTCATGTCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 3 .36 RPM |
| bodymap2_adrenal | 4 .46 RPM |
| bodymap2_brain | 27 .31 RPM |
| bodymap2_breast | 5 .04 RPM |
| bodymap2_colon | 3 .48 RPM |
| bodymap2_heart | 3 .21 RPM |
| bodymap2_kidney | 7 .80 RPM |
| bodymap2_liver | 4 .25 RPM |
| bodymap2_lung | 4 .82 RPM |
| bodymap2_lymph_node | 2 .94 RPM |
| bodymap2_ovary | 6 .57 RPM |
| bodymap2_prostate | 5 .39 RPM |
| bodymap2_skeletal_muscle | 5 .04 RPM |
| bodymap2_testis | 19 .46 RPM |
| bodymap2_thyroid | 5 .07 RPM |
| bodymap2_white_blood_cells | 8 .54 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007730 | ortholog_many2many | 5 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000019288 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000115091 | within_species_paralog | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000004885 | ortholog_one2many | 5 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000015688 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000000459 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003249 | possible_ortholog | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000018206 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000019897 | ortholog_one2one | 8 retrogenes | |
| Tupaia belangeri | ENSTBEG00000011647 | possible_ortholog | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000016334 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_561 | 76.36 | 77.75 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
| 2. | retro_hsap_1676 | 75.74 | 64.35 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 3. | retro_hsap_2126 | 76.52 | 77.75 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 4. | retro_hsap_2540 | 76.83 | 77.75 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 5. | retro_hsap_2966 | 77.20 | 77.75 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 6. | retro_hsap_4334 | 77.44 | 77.75 | Please wait, loading |
Please wait, loading |
Please wait, loading |
| 7. | retro_hsap_4921 | 77.93 | 82.47 | Please wait, loading |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSG00000133627 retrocopies