Parental gene:

ACTR1A, ENSG00000138107

Aliases:ACTR1A, ARP1, CTRN1
Description:ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) [Source:HGNC Symbol;Acc:167]
Organism:Human (Homo sapiens)
Coordinates:10:104238985..104262482(-)


>ENSG00000138107
ATGGAGTCCTACGATGTGATCGCCAACCAGCCTGTCGTGATCGACAACGGATCCGGTGTGATTAAAGCTGGTTTTGCTGG
TGATCAGATCCCCAAATACTGCTTTCCAAACTATGTGGGCCGACCCAAGCACGTTCGTGTCATGGCAGGAGCCCTTGAAG
GCGACATCTTCATTGGCCCCAAAGCTGAGGAGCACCGAGGGCTGCTTTCAATCCGCTATCCCATGGAGCATGGCATCGTC
AAGGATTGGAACGACATGGAACGCATTTGGCAATATGTCTATTCTAAGGACCAGCTGCAGACTTTCTCAGAGGAGCATCC
TGTGCTCCTGACTGAGGCGCCTTTAAACCCACGAAAAAACCGGGAACGAGCTGCCGAAGTTTTCTTCGAGACCTTCAATG
TGCCCGCTCTTTTCATCTCCATGCAAGCTGTACTCAGCCTTTACGCTACAGGCAGGACCACAGGGGTGGTGCTGGATTCT
GGGGATGGAGTCACCCATGCTGTGCCCATCTATGAGGGCTTTGCCATGCCCCACTCCATCATGCGCATCGACATCGCGGG
CCGGGACGTCTCTCGCTTCCTGCGCCTCTACCTGCGTAAGGAGGGCTACGACTTCCACTCATCCTCTGAGTTTGAGATTG
TCAAGGCCATAAAAGAAAGAGCCTGTTACCTATCCATAAACCCCCAAAAGGATGAGACGCTAGAGACAGAGAAAGCTCAG
TACTACCTGCCTGATGGCAGCACCATTGAGATTGGTCCTTCCCGATTCCGGGCCCCTGAGTTGCTCTTCAGGCCAGATTT
GATTGGAGAGGAGAGTGAAGGCATCCACGAGGTCCTGGTGTTCGCCATTCAGAAGTCAGACATGGACCTGCGGCGCACGC
TTTTCTCTAACATTGTCCTCTCAGGAGGCTCTACCCTGTTCAAAGGTTTTGGTGACAGGCTCCTGAGTGAAGTGAAGAAA
CTAGCTCCAAAAGATGTGAAGATCAGGATATCTGCACCTCAGGAGAGACTGTATTCCACGTGGATTGGGGGCTCCATCCT
TGCCTCCCTGGACACCTTTAAGAAGATGTGGGTCTCCAAAAAGGAATATGAGGAAGACGGTGCCCGATCCATCCACAGAA
AAACCTTCTAA

Library Parental gene expression (RPM)
bodymap2_liver 39 .76 RPM
bodymap2_lung 122 .75 RPM
bodymap2_breast 81 .93 RPM
bodymap2_adipose 104 .38 RPM
bodymap2_adrenal 76 .80 RPM
bodymap2_skeletal_muscle 255 .50 RPM
bodymap2_thyroid 62 .82 RPM
bodymap2_prostate 147 .91 RPM
bodymap2_colon 82 .14 RPM
bodymap2_testis 93 .70 RPM
bodymap2_brain 107 .80 RPM
bodymap2_heart 75 .32 RPM
bodymap2_white_blood_cells 104 .09 RPM
bodymap2_lymph_node 99 .48 RPM
bodymap2_ovary 65 .95 RPM
bodymap2_kidney 84 .25 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000075624 other_paralog 6 retrogenes
retro_hsap_1563, retro_hsap_1894, retro_hsap_3386, retro_hsap_38, retro_hsap_4204, retro_hsap_518,
Homo sapiens ENSG00000184009 other_paralog 10 retrogenes
retro_hsap_1548, retro_hsap_1607, retro_hsap_2405, retro_hsap_2591, retro_hsap_2605, retro_hsap_3466, retro_hsap_3631, retro_hsap_409, retro_hsap_4818, retro_hsap_4935,
Mus musculus ENSMUSG00000025228 ortholog_one2one 1 retrogene
retro_mmus_2686,
Nomascus leucogenys ENSNLEG00000015157 ortholog_one2one 1 retrogene
retro_nleu_2751,
Pongo abelii ENSPPYG00000002605 ortholog_one2one 1 retrogene
retro_pabe_1930,
Pan troglodytes ENSPTRG00000002894 ortholog_one2one 1 retrogene
retro_ptro_1567,
Drosophila melanogaster FBgn0011745 ortholog_one2many 1 retrogene
retro_dmel_80,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2141 81.77 53.99
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Download FASTA sequences of all ENSG00000138107 retrocopies