Parental gene:

ACTR1A, ENSPPYG00000002605

Aliases:None
Description:ARP1 actin-related protein 1 homolog A, centractin alpha (yeast) [Source:HGNC Symbol;Acc:167]
Organism:Orangutan (Pongo abelii)
Coordinates:10:101529955..101554204(-)


>ENSPPYG00000002605
ATGGAGTCCTACGATGTGATCGCCAACCAGCCTGTCGTGATCGACAACGGATCCGGTGTGATTAAAGCTGGTTTTGCTGG
TGATCAGATCCCCAAATACTGCTTTCCAAACTATGTGGGCCGACCCAAGCACGTTCGTGTCATGGCAGGAGCCCTTGAAG
GCGACATCTTCATTGGCCCCAAAGCCGAGGAGCACCGAGGTCTGCTTTCAATCCGCTATCCCATGGAGCATGGCATCGTC
AAGGATTGGAACGACATGGAACGCATTTGGCAATATGTCTATTCTAAGGACCAGCTGCAGACTTTCTCAGAGGAGCATCC
TGTGCTCCTGACTGAGGCGCCTTTAAACCCACGAAAAAACCGGGAACGAGCTGCCGAAGTTTTCTTCGAGACCTTCAATG
TGCCCGCTCTTTTCATCTCCATGCAAGCTGTACTCAGCCTTTATGCTACAGGCAGGACCACAGGGGTGGTGCTGGATTCT
GGGGATGGAGTCACCCATGCTGTGCCCATCTATGAGGGCTTTGCCATGCCCCACTCCATCATGCGCATCGACATCGCGGG
CCGGGACGTCTCTCGCTTCCTGCGCCTCTACCTGCGTAAGGAGGGCTACGACTTCCACTCATCCTCTGAGTTTGAGATTG
TCAAGGCCATAAAAGAAAGAGCCTGCTACCTATCCATAAACCCCCAAAAGGATGAGACGCTAGAGACAGAGAAAGCTCAG
TACTACCTGCCTGATGGCAGCACCATTGAGATTGGTCCTTCCCGATTCCGGGCCCCTGAGCTGCTCTTCAGGCCCGATTT
GATTGGAGAGGAGAGTGAAGGCATCCACGAGGTCCTGGTGTTCGCCATTCAGAAGTCAGACATGGACCTGCGGCGCACTC
TTTTCTCCAACATTGTCCTCTCAGGAGGCTCCACCCTGTTCAAAGGTTTTGGTGACAGGCTCCTGAGTGAAGTGAAGAAA
CTAGCTCCGAAAGATGTGAAGATCAGGATATCTGCACCTCAGGAGAGACTGTATTCCACGTGGATTGGAGGCTCCATCCT
TGCCTCCCTGGACACCTTTAAGAAGATGTGGGTCTCCAAGAAGGAATATGAGGAAGACGGTGCCCGATCCATCCACAGAA
AAACCTTCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 145 .08 RPM
SRP007412_cerebellum 95 .70 RPM
SRP007412_heart 31 .28 RPM
SRP007412_kidney 67 .35 RPM
SRP007412_liver 31 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000138107 ortholog_one2one 1 retrogene
retro_hsap_2141,
Mus musculus ENSMUSG00000025228 ortholog_one2one 1 retrogene
retro_mmus_2686,
Nomascus leucogenys ENSNLEG00000015157 ortholog_one2one 1 retrogene
retro_nleu_2751,
Pongo abelii ENSPPYG00000002459 other_paralog 1 retrogene
retro_pabe_3027,
Pongo abelii ENSPPYG00000006318 other_paralog 1 retrogene
retro_pabe_1317,
Pongo abelii ENSPPYG00000008735 other_paralog 11 retrogenes
retro_pabe_1091, retro_pabe_1391, retro_pabe_1727, retro_pabe_2187, retro_pabe_2308, retro_pabe_2621, retro_pabe_2945, retro_pabe_3381, retro_pabe_3475, retro_pabe_3760, retro_pabe_600,
Pongo abelii ENSPPYG00000017336 other_paralog 23 retrogenes
retro_pabe_1281, retro_pabe_1292, retro_pabe_1575, retro_pabe_1610, retro_pabe_1772, retro_pabe_1816, retro_pabe_1911, retro_pabe_2042, retro_pabe_2168, retro_pabe_2175, retro_pabe_2188, retro_pabe_227, retro_pabe_2754, retro_pabe_2811, retro_pabe_2824, retro_pabe_2862, retro_pabe_2978, retro_pabe_309, retro_pabe_3563, retro_pabe_3567, retro_pabe_3746, retro_pabe_745, retro_pabe_86,
Pan troglodytes ENSPTRG00000002894 ortholog_one2one 1 retrogene
retro_ptro_1567,
Drosophila melanogaster FBgn0011745 ortholog_one2many 1 retrogene
retro_dmel_80,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1930 83.44 84.84
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Download FASTA sequences of all ENSPPYG00000002605 retrocopies