Parental gene:

FAM60A, ENSG00000139146

Aliases:FAM60A, C12orf14, TERA
Description:family with sequence similarity 60, member A [Source:HGNC Symbol;Acc:30702]
Organism:Human (Homo sapiens)
Coordinates:12:31433517..31479992(-)


>ENSG00000139146
ATGTTTGGTTTTCACAAGCCAAAGATGTACCGAAGTATAGAGGGCTGCTGTATTTGCAGAGCTAAGTCCTCCAGTTCTCG
ATTCACTGACAGTAAACGCTATGAAAAGGACTTCCAGAGCTGTTTTGGATTGCATGAGACTCGTTCAGGAGACATCTGCA
ATGCCTGTGTCCTGCTTGTGAAAAGATGGAAGAAGTTGCCAGCAGGATCAAAAAAAAACTGGAATCATGTGGTAGATGCA
AGGGCTGGACCCAGTCTAAAGACTACATTGAAACCAAAGAAAGTGAAAACTCTATCTGGGAACAGGATAAAAAGCAACCA
GATCAGTAAACTGCAGAAGGAATTTAAACGTCATAATTCTGATGCTCACAGTACCACCTCAAGTGCCTCCCCAGCTCAAT
CTCCTTGTTACAGTAACCAGTCAGATGACGGCTCAGATACAGAGATGGCTTCTGGTTCTAACAGAACACCAGTTTTTTCC
TTTTTAGATCTCACTTACTGGAAAAGACAGAAGATATGTTGTGGGATCATCTATAAAGGCCGTTTTGGGGAAGTCCTCAT
TGACACACATCTCTTCAAGCCTTGCTGCAGCAATAAGAAAGCAGCTGCTGAGAAGCCAGAGGAGCAGGGGCCAGAGCCTC
TGCCCATCTCCACTCAGGAGTGGTGA

Library Parental gene expression (RPM)
bodymap2_liver 3 .93 RPM
bodymap2_lung 98 .56 RPM
bodymap2_breast 21 .95 RPM
bodymap2_adipose 29 .16 RPM
bodymap2_adrenal 52 .26 RPM
bodymap2_skeletal_muscle 5 .60 RPM
bodymap2_thyroid 30 .92 RPM
bodymap2_prostate 55 .22 RPM
bodymap2_colon 33 .64 RPM
bodymap2_testis 33 .97 RPM
bodymap2_brain 6 .26 RPM
bodymap2_heart 8 .64 RPM
bodymap2_white_blood_cells 71 .76 RPM
bodymap2_lymph_node 49 .23 RPM
bodymap2_ovary 47 .17 RPM
bodymap2_kidney 52 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000001161 ortholog_one2one 1 retrogene
retro_btau_1020,
Canis familiaris ENSCAFG00000010685 ortholog_one2one 4 retrogenes
retro_cfam_1120, retro_cfam_1552, retro_cfam_1692, retro_cfam_1837,
Choloepus hoffmanni ENSCHOG00000007193 ortholog_one2one 17 retrogenes
retro_chof_109, retro_chof_1108, retro_chof_1136, retro_chof_1255, retro_chof_1614, retro_chof_1689, retro_chof_1770, retro_chof_1971, retro_chof_2126, retro_chof_2493, retro_chof_2576, retro_chof_2587, retro_chof_453, retro_chof_511, retro_chof_856, retro_chof_979, retro_chof_998,
Callithrix jacchus ENSCJAG00000001215 ortholog_one2many 3 retrogenes
retro_cjac_1072, retro_cjac_3154, retro_cjac_3289,
Felis catus ENSFCAG00000008955 ortholog_one2one 4 retrogenes
retro_fcat_1311, retro_fcat_1339, retro_fcat_58, retro_fcat_965,
Gorilla gorilla ENSGGOG00000015484 ortholog_one2one 3 retrogenes
retro_ggor_1405, retro_ggor_1415, retro_ggor_2704,
Myotis lucifugus ENSMLUG00000009827 ortholog_one2one 3 retrogenes
retro_mluc_1663, retro_mluc_1672, retro_mluc_765,
Macaca mulatta ENSMMUG00000009155 ortholog_one2one 2 retrogenes
retro_mmul_1074, retro_mmul_2324,
Nomascus leucogenys ENSNLEG00000016487 ortholog_one2one 1 retrogene
retro_nleu_1213,
Otolemur garnettii ENSOGAG00000008927 ortholog_one2one 4 retrogenes
retro_ogar_1253, retro_ogar_1762, retro_ogar_2117, retro_ogar_251,
Pongo abelii ENSPPYG00000004396 ortholog_one2one 2 retrogenes
retro_pabe_1592, retro_pabe_3309,
Rattus norvegicus ENSRNOG00000046048 possible_ortholog 1 retrogene
retro_rnor_2858,
Rattus norvegicus ENSRNOG00000049943 possible_ortholog 2 retrogenes
retro_rnor_1121, retro_rnor_2917,
Sarcophilus harrisii ENSSHAG00000006261 ortholog_one2one 1 retrogene
retro_shar_670,
Ictidomys tridecemlineatus ENSSTOG00000007097 ortholog_one2many 1 retrogene
retro_itri_16,
Tursiops truncatus ENSTTRG00000008465 ortholog_one2one 3 retrogenes
retro_ttru_1162, retro_ttru_1498, retro_ttru_984,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1928 91.48 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_hsap_1945 95.95 66.97
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_hsap_4029 76.92 58.37
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000139146 retrocopies