Parental gene:

TDG, ENSG00000139372

Aliases:TDG, hTDG
Description:thymine-DNA glycosylase [Source:HGNC Symbol;Acc:11700]
Organism:Human (Homo sapiens)
Coordinates:12:104359581..104382652(+)


>ENSG00000139372
ATGGAAGCGGAGAACGCGGGCAGCTATTCCCTTCAGCAAGCTCAAGCTTTTTATACGTTTCCATTTCAACAACTGATGGC
TGAAGCTCCTAATATGGCAGTTGTGAATGAACAGCAAATGCCAGAAGAAGTTCCAGCCCCAGCTCCTGCTCAGGAACCAG
TGCAAGAGGCTCCAAAAGGAAGAAAAAGAAAACCCAGAACAACAGAACCAAAACAACCAGTGGAACCCAAAAAACCTGTT
GAGTCAAAAAAATCTGGCAAGTCTGCAAAATCAAAAGAAAAACAAGAAAAAATTACAGACACATTTAAAGTAAAAAGAAA
AGTAGACCGTTTTAATGGTGTTTCAGAAGCTGAACTTCTGACCAAGACTCTCCCCGATATTTTGACCTTCAATCTGGACA
TTGTCATTATTGGCATAAACCCGGGACTAATGGCTGCTTACAAAGGGCATCATTACCCTGGACCTGGAAACCATTTTTGG
AAGTGTTTGTTTATGTCAGGGCTCAGTGAGGTCCAGCTGAACCATATGGATGATCACACTCTACCAGGGAAGTATGGTAT
TGGATTTACCAACATGGTGGAAAGGACCACGCCCGGCAGCAAAGATCTCTCCAGTAAAGAATTTCGTGAAGGAGGACGTA
TTCTAGTACAGAAATTACAGAAATATCAGCCACGAATAGCAGTGTTTAATGGAAAATGTATTTATGAAATTTTTAGTAAA
GAAGTTTTTGGAGTAAAGGTTAAGAACTTGGAATTTGGGCTTCAGCCCCATAAGATTCCAGACACAGAAACTCTCTGCTA
TGTTATGCCATCATCCAGTGCAAGATGTGCTCAGTTTCCTCGAGCCCAAGACAAAGTTCATTACTACATAAAACTGAAGG
ACTTAAGAGATCAGTTGAAAGGCATTGAACGAAATATGGACGTTCAAGAGGTGCAATATACATTTGACCTACAGCTTGCC
CAAGAGGATGCAAAGAAGATGGCTGTTAAGGAAGAAAAATATGATCCAGGTTATGAGGCAGCATATGGTGGTGCTTACGG
AGAAAATCCATGCAGCAGTGAACCTTGTGGCTTCTCTTCAAATGGGCTAATTGAGAGCGTGGAGTTAAGAGGAGAATCAG
CTTTCAGTGGCATTCCTAATGGGCAGTGGATGACCCAGTCATTTACAGACCAAATTCCTTCCTTTAGTAATCACTGTGGA
ACACAAGAACAGGAAGAAGAAAGCCATGCTTAA

Library Parental gene expression (RPM)
bodymap2_liver 8 .70 RPM
bodymap2_lung 13 .31 RPM
bodymap2_breast 12 .20 RPM
bodymap2_adipose 8 .61 RPM
bodymap2_adrenal 22 .70 RPM
bodymap2_skeletal_muscle 4 .07 RPM
bodymap2_thyroid 19 .30 RPM
bodymap2_prostate 13 .41 RPM
bodymap2_colon 9 .65 RPM
bodymap2_testis 14 .78 RPM
bodymap2_brain 13 .67 RPM
bodymap2_heart 12 .07 RPM
bodymap2_white_blood_cells 33 .10 RPM
bodymap2_lymph_node 15 .62 RPM
bodymap2_ovary 21 .44 RPM
bodymap2_kidney 19 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000013722 ortholog_one2one 1 retrogene
retro_dnov_1749,
Echinops telfairi ENSETEG00000019930 ortholog_one2many 1 retrogene
retro_etel_2184,
Loxodonta africana ENSLAFG00000003813 ortholog_one2one 1 retrogene
retro_lafr_460,
Mus musculus ENSMUSG00000034674 ortholog_one2one 4 retrogenes
retro_mmus_1125, retro_mmus_1363, retro_mmus_3040, retro_mmus_637,
Oryctolagus cuniculus ENSOCUG00000016313 ortholog_one2one 1 retrogene
retro_ocun_1289,
Rattus norvegicus ENSRNOG00000027124 ortholog_one2many 1 retrogene
retro_rnor_2286,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_980 91.97 100.00
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Download FASTA sequences of all ENSG00000139372 retrocopies