Parental gene:

TDG, ENSOCUG00000016313

Aliases:None
Description:thymine-DNA glycosylase [Source:HGNC Symbol;Acc:11700]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:4:83134720..83142370(+)


>ENSOCUG00000016313
GTTTCAGAGGCTCCAAAAGGAAGAAAAAGAAAAACTCGAGCAACAGAACCCAAAAAACCAGCAGAACCCAAAAAACCTGC
TGAGGCAAAAAAATCTGGCAAATCTGCCAAGTCAAAGGAAAAGCAAGAAAAAATTACAGATGCGTTTAAGGTGAAAAGGA
AAGTGGACCGTTTTAATGGCGTGTCAGAGGCTGAACTTCTGACCAAGACTCTCCCTGATATTTTGACCTTCAACCTGGAC
ATTGTAATTATTGGCATAAATCCAGGACTAATGGCTGCTTACAAAGGACATCATTACCCTGGACCTGGAAACCATTTTTG
GAAGTGTCTGTTCATGTCAGGGCTGAGTGAGGTCCAGCTGAACCACATGGACGATCACACTTTACCTGGGAAGTATGGCA
TTGGATTTACCAATATGGTGGAGAGGACGACGCCAGGCAGCAAGGATCTTTCCAGTAAAGAATTTCGTGAAGGAGGACGT
ATTCTAGTCCAGAAATTACAGAAATATCAGCCACGAATAGCAGTGTTTAATGGAAAATGTATTTATGAAATTTTTAGTAG
AGAAGTTTTTGGAGTAAAGGTTAAGAACTTGGAATTTGGGCTTCAACCCCACAAGATTCCAGACACAGAAACTCTCTGCT
ATGTGATGCCATCATCCAGTGCAAGGTGTGCTCAGTTTCCTCGCGCTCAGGACAAAGTTCATTACTACATTAAGTTGAAG
GACTTAAGAGATCAGTTGAAAGGCATTGAACGAAACACAGACGTTCAAGAAGTGCGGTATACATTTGACCTACAGCTTGC
CCAAGAGGATGCAAAGAAGATGGCTGTTAAGGAAGAAAAATACGATCCTGGTTATGAAGCAGCCTACGGTGGTGCTTACA
GTGACAACCCGTGCAATAGTGAACCTTGCAGCTTCCCGTCTAATGGGCTAGCTGCGGACAGTGCGGAGTTAAGAGAATCA
GCTCTCAATGCCATTCCAGATGGGCAGTGGATGGCCCAGCCGTTTACAGACCAGATTCCTTCCCTGAACAATCACTGTGG
AGCGCAAGAGCAG

Library Parental gene expression (RPM)
SRP017611_brain 9 .66 RPM
SRP017611_kidney 6 .89 RPM
SRP017611_liver 5 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000013722 ortholog_one2one 1 retrogene
retro_dnov_1749,
Echinops telfairi ENSETEG00000019930 ortholog_one2many 1 retrogene
retro_etel_2184,
Homo sapiens ENSG00000139372 ortholog_one2one 1 retrogene
retro_hsap_980,
Loxodonta africana ENSLAFG00000003813 ortholog_one2one 1 retrogene
retro_lafr_460,
Mus musculus ENSMUSG00000034674 ortholog_one2one 4 retrogenes
retro_mmus_1125, retro_mmus_1363, retro_mmus_3040, retro_mmus_637,
Rattus norvegicus ENSRNOG00000027124 ortholog_one2many 1 retrogene
retro_rnor_2286,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1289 74.86 99.43
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Download FASTA sequences of all ENSOCUG00000016313 retrocopies