Parental gene:

ATP6V1B2, ENSG00000147416

Aliases:ATP6V1B2, ATP6B1B2, ATP6B2, HO57, VATB, VPP3, Vma2
Description:ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2 [Source:HGNC Symbol;Acc:854]
Organism:Human (Homo sapiens)
Coordinates:8:20054877..20084330(+)


>ENSG00000147416
ATGGCGCTGCGGGCGATGCGGGGGATTGTCAACGGGGCCGCACCCGAGCTACCCGTGCCCACCGGTGGGCCGGCGGTGGG
AGCTCGGGAGCAGGCGCTGGCAGTCAGTCGGAACTACCTCTCCCAGCCTCGCCTCACATACAAGACAGTATCTGGAGTCA
ATGGTCCACTAGTGATCTTAGATCATGTTAAGTTTCCCAGGTATGCTGAAATTGTCCATTTGACCTTACCGGATGGCACA
AAGAGAAGTGGGCAAGTTCTGGAAGTTAGTGGTTCCAAGGCAGTAGTTCAGGTATTTGAAGGGACTTCAGGTATAGATGC
TAAGAAAACGTCCTGTGAGTTTACTGGGGATATTCTCCGAACACCGGTGTCTGAGGATATGCTTGGTCGGGTATTCAATG
GATCGGGAAAACCCATTGACAGAGGTCCTGTTGTACTGGCCGAAGACTTCCTTGATATCATGGGTCAGCCAATCAACCCT
CAATGTCGAATCTACCCAGAGGAAATGATTCAGACTGGCATTTCGGCCATCGATGGGATGAACAGTATTGCTAGGGGGCA
GAAAATTCCTATCTTCTCTGCTGCTGGGCTACCACACAATGAGATTGCAGCTCAGATCTGTCGCCAGGCTGGTTTGGTAA
AGAAATCCAAAGATGTAGTAGACTACAGTGAGGAAAATTTTGCAATTGTATTTGCTGCTATGGGTGTAAACATGGAAACT
GCCCGGTTCTTCAAATCTGACTTTGAAGAAAATGGCTCAATGGACAATGTCTGCCTCTTTTTGAACTTGGCTAATGACCC
AACCATTGAGCGAATTATCACTCCTCGCCTGGCTCTAACCACAGCTGAATTTCTGGCGTACCAATGTGAGAAACATGTAT
TGGTTATTCTAACAGACATGAGTTCTTATGCTGAAGCACTTCGAGAGGTTTCAGCAGCCAGGGAAGAGGTACCTGGTCGA
CGAGGTTTTCCAGGTTACATGTATACAGATTTAGCCACGATATATGAACGCGCTGGGCGAGTGGAAGGGAGAAACGGCTC
GATTACTCAAATCCCTATTCTAACCATGCCTAATGATGATATCACTCACCCCATCCCAGACTTGACTGGCTACATTACAG
AGGGGCAGATCTATGTGGACAGACAGCTGCACAACAGACAGATTTATCCACCTATCAATGTGCTGCCCTCACTATCACGG
TTAATGAAGTCTGCTATTGGAGAAGGGATGACCAGGAAGGATCATGCCGATGTATCTAACCAGCTATATGCGTGCTATGC
TATTGGAAAGGATGTGCAAGCCATGAAAGCTGTCGTTGGAGAAGAAGCCCTTACCTCAGATGATCTTCTCTACTTGGAAT
TTCTGCAGAAGTTTGAGAGGAACTTCATTGCTCAGGGTCCTTACGAAAATCGCACTGTCTTTGAGACTTTGGACATTGGC
TGGCAGCTACTCCGAATCTTCCCCAAAGAAATGCTGAAGAGAATCCCTCAGAGCACCCTCAGCGAATTTTACCCTCGAGA
CTCTGCAAAGCATTAG

Library Parental gene expression (RPM)
bodymap2_liver 41 .53 RPM
bodymap2_lung 156 .63 RPM
bodymap2_breast 72 .20 RPM
bodymap2_adipose 105 .31 RPM
bodymap2_adrenal 76 .33 RPM
bodymap2_skeletal_muscle 78 .99 RPM
bodymap2_thyroid 92 .97 RPM
bodymap2_prostate 87 .71 RPM
bodymap2_colon 93 .12 RPM
bodymap2_testis 170 .30 RPM
bodymap2_brain 376 .61 RPM
bodymap2_heart 50 .73 RPM
bodymap2_white_blood_cells 585 .22 RPM
bodymap2_lymph_node 88 .33 RPM
bodymap2_ovary 86 .82 RPM
bodymap2_kidney 114 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003668 ortholog_one2one 1 retrogene
retro_chof_2287,
Gorilla gorilla ENSGGOG00000003888 ortholog_one2one 1 retrogene
retro_ggor_2879,
Microcebus murinus ENSMICG00000001791 ortholog_one2one 1 retrogene
retro_mmur_854,
Nomascus leucogenys ENSNLEG00000000794 ortholog_one2one 1 retrogene
retro_nleu_1460,
Pan troglodytes ENSPTRG00000020040 ortholog_one2one 1 retrogene
retro_ptro_2917,
Tarsius syrichta ENSTSYG00000010477 ortholog_one2one 1 retrogene
retro_tsyr_2096,
Tursiops truncatus ENSTTRG00000013650 ortholog_one2one 1 retrogene
retro_ttru_1845,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4308 71.70 51.27
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Download FASTA sequences of all ENSG00000147416 retrocopies