Parental gene:

GLUD1, ENSG00000148672

Aliases:GLUD1, GDH, GDH1, GLUD
Description:glutamate dehydrogenase 1 [Source:HGNC Symbol;Acc:4335]
Organism:Human (Homo sapiens)
Coordinates:10:88810242..88854623(-)


>ENSG00000148672
ATGTACCGCTACCTGGGCGAAGCGCTGTTGCTGTCCCGGGCCGGGCCCGCTGCCCTGGGCTCGGCGTCCGCCGACTCGGC
CGCGTTGCTGGGCTGGGCCCGGGGACAGCCCGCCGCCGCCCCGCAGCCGGGGCTGGCATTGGCCGCCCGGCGCCACTACA
GCGAGGCGGTGGCCGACCGCGAGGACGACCCCAACTTCTTCAAGATGGTGGAGGGCTTCTTCGATCGCGGCGCCAGCATC
GTGGAGGACAAGCTGGTGGAGGACCTGAGGACCCGGGAGAGCGAGGAGCAGAAGCGGAACCGGGTGCGCGGCATCCTGCG
GATCATCAAGCCCTGCAACCATGTGCTGAGTCTCTCCTTCCCCATCCGGCGCGACGACGGCTCCTGGGAGGTCATCGAAG
GCTACCGGGCCCAGCACAGCCAGCACCGCACGCCCTGCAAGGGAGGTATCCGTTACAGCACTGATGTGAGTGTAGATGAA
GTAAAAGCTTTGGCTTCTCTGATGACATACAAGTGTGCAGTGGTTGATGTGCCGTTTGGGGGTGCTAAAGCTGGTGTTAA
GATCAATCCCAAGAACTATACTGATAATGAATTGGAAAAGATCACAAGGAGGTTCACCATGGAGCTAGCAAAAAAGGGCT
TTATTGGTCCTGGCATTGATGTGCCTGCTCCAGACATGAGCACAGGTGAGCGGGAGATGTCCTGGATCGCTGATACCTAT
GCCAGCACCATAGGGCACTATGATATTAATGCACACGCCTGTGTTACTGGTAAACCCATCAGCCAAGGGGGAATCCATGG
ACGCATCTCTGCTACTGGCCGTGGTGTCTTCCATGGGATTGAAAATTTCATCAATGAAGCTTCTTACATGAGCATTTTAG
GAATGACACCAGGGTTTGGAGATAAAACATTTGTTGTTCAGGGATTTGGTAATGTGGGCCTACACTCTATGAGATATTTA
CATCGTTTTGGTGCTAAATGTATTGCTGTTGGTGAGTCTGATGGGAGTATATGGAATCCAGATGGTATTGACCCAAAGGA
ACTGGAAGACTTCAAATTGCAACATGGGTCCATTCTGGGCTTCCCCAAGGCAAAGCCCTATGAAGGAAGCATCTTGGAGG
CCGACTGTGACATACTGATCCCAGCTGCCAGTGAGAAGCAGTTGACCAAATCCAACGCACCCAGAGTCAAAGCCAAGATC
ATTGCTGAAGGTGCCAATGGGCCAACAACTCCAGAAGCTGACAAGATCTTCCTGGAGAGAAACATTATGGTTATTCCAGA
TCTCTACTTGAATGCTGGAGGAGTGACAGTATCTTACTTTGAGTGGCTGAAGAATCTAAATCATGTCAGCTATGGCCGTT
TGACCTTCAAATATGAAAGGGATTCTAACTACCACTTGCTCATGTCTGTTCAAGAGAGTTTAGAAAGAAAATTTGGAAAG
CATGGTGGAACTATTCCCATTGTACCCACGGCAGAGTTCCAAGACAGGATATCGGGTGCATCTGAGAAAGACATCGTGCA
CTCTGGCTTGGCATACACAATGGAGCGTTCTGCCAGGCAAATTATGCGCACAGCCATGAAGTATAACCTGGGATTGGACC
TGAGAACAGCTGCCTATGTTAATGCCATTGAGAAAGTCTTCAAAGTGTACAATGAAGCTGGTGTGACCTTCACATAG

Library Parental gene expression (RPM)
bodymap2_liver 1016 .55 RPM
bodymap2_lung 263 .63 RPM
bodymap2_breast 174 .09 RPM
bodymap2_adipose 183 .51 RPM
bodymap2_adrenal 138 .43 RPM
bodymap2_skeletal_muscle 83 .03 RPM
bodymap2_thyroid 160 .20 RPM
bodymap2_prostate 199 .35 RPM
bodymap2_colon 189 .68 RPM
bodymap2_testis 131 .61 RPM
bodymap2_brain 430 .52 RPM
bodymap2_heart 106 .82 RPM
bodymap2_white_blood_cells 200 .46 RPM
bodymap2_lymph_node 131 .94 RPM
bodymap2_ovary 174 .11 RPM
bodymap2_kidney 252 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000007540 ortholog_one2many 2 retrogenes
retro_btau_1413, retro_btau_1741,
Canis familiaris ENSCAFG00000016095 ortholog_many2many 1 retrogene
retro_cfam_747,
Choloepus hoffmanni ENSCHOG00000001101 possible_ortholog 1 retrogene
retro_chof_2002,
Callithrix jacchus ENSCJAG00000011633 ortholog_one2many 1 retrogene
retro_cjac_2830,
Dipodomys ordii ENSDORG00000009767 ortholog_one2many 1 retrogene
retro_dord_400,
Equus caballus ENSECAG00000007371 ortholog_one2many 2 retrogenes
retro_ecab_886, retro_ecab_919,
Echinops telfairi ENSETEG00000019638 ortholog_one2many 2 retrogenes
retro_etel_141, retro_etel_2024,
Gorilla gorilla ENSGGOG00000015770 ortholog_one2one 1 retrogene
retro_ggor_2954,
Loxodonta africana ENSLAFG00000012059 ortholog_one2many 1 retrogene
retro_lafr_504,
Microcebus murinus ENSMICG00000016526 ortholog_one2many 1 retrogene
retro_mmur_524,
Monodelphis domestica ENSMODG00000002756 ortholog_many2many 1 retrogene
retro_mdom_124,
Nomascus leucogenys ENSNLEG00000011658 ortholog_one2one 1 retrogene
retro_nleu_36,
Otolemur garnettii ENSOGAG00000003641 ortholog_one2many 1 retrogene
retro_ogar_2757,
Procavia capensis ENSPCAG00000008662 ortholog_many2many 1 retrogene
retro_pcap_11,
Pongo abelii ENSPPYG00000002827 ortholog_one2one 3 retrogenes
retro_pabe_3109, retro_pabe_3213, retro_pabe_79,
Pan troglodytes ENSPTRG00000002711 ortholog_one2one 4 retrogenes
retro_ptro_3162, retro_ptro_3283, retro_ptro_3285, retro_ptro_3290,
Ictidomys tridecemlineatus ENSSTOG00000012843 ortholog_one2many 1 retrogene
retro_itri_737,
Tarsius syrichta ENSTSYG00000001578 ortholog_one2many 1 retrogene
retro_tsyr_313,
Tursiops truncatus ENSTTRG00000008145 ortholog_one2many 1 retrogene
retro_ttru_950,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_31 95.70 100.00
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Download FASTA sequences of all ENSG00000148672 retrocopies