Parental gene: | RIMKLB, ENSG00000166532 |
| Aliases: | RIMKLB, FAM80B, NAAGS, NAAGS-I |
| Description: | ribosomal modification protein rimK-like family member B [Source:HGNC Symbol;Acc:29228] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 12:8834195..8935691(+) |
>ENSG00000166532
ATGTGTAGTTCTGTGGCTGCCAAGTTGTGGTTTTTGACAGATCGTCGCATCAGGGAAGACTATCCTCAAAAAGAGATTTT
ACGAGCATTGAAGGCCAAATGTTGTGAGGAGGAACTGGACTTTAGGGCTGTGGTGATGGATGAGGTGGTGCTGACAATCG
AGCAAGGAAACCTGGGTCTGCGGATCAATGGAGAGCTAATCACTGCCTACCCACAAGTGGTGGTAGTCAGAGTACCAACC
CCTTGGGTGCAAAGTGATAGTGACATCACTGTTTTGCGCCATCTAGAGAAGATGGGATGTCGGTTAATGAACCGACCTCA
AGCCATCCTGAACTGCGTTAATAAGTTCTGGACATTTCAAGAGTTGGCTGGCCATGGTGTTCCTCTGCCGGATACTTTCT
CTTATGGTGGCCACGAAAATTTTGCTAAAATGATTGATGAGGCTGAAGTTCTGGAGTTCCCAATGGTAGTAAAGAATACG
CGGGGTCACAGAGGTAAAGCTGTTTTCTTGGCTCGAGATAAGCACCATTTGGCTGATCTAAGCCATCTTATTCGCCATGA
AGCGCCATACCTGTTCCAGAAGTATGTTAAAGAGTCTCATGGACGGGATGTACGTGTCATTGTCGTGGGAGGCCGTGTGG
TTGGCACCATGTTACGTTGTTCAACAGATGGGAGAATGCAAAGCAACTGCTCATTAGGTGGTGTGGGGATGATGTGCTCA
TTGAGTGAACAAGGGAAGCAGCTAGCTATCCAGGTGTCTAATATCCTGGGGATGGATGTGTGTGGCATTGATCTGCTGAT
GAAAGATGACGGCTCCTTCTGCGTCTGTGAGGCCAATGCAAATGTAGGTTTCATCGCCTTTGATAAGGCTTGTAATCTAG
ATGTAGCTGGTATCATAGCAGACTATGCCGCCTCCCTTCTACCCTCTGGCCGGCTCACCCGGCGTATGTCCCTGCTCTCC
GTGGTGTCCACTGCCAGTGAGACTAGTGAGCCGGAGCTGGGTCCCCCAGCCAGCACTGCTGTTGACAACATGAGTGCAAG
TTCCAGCTCTGTTGACAGCGACCCTGAAAGCACGGAGCGAGAGCTGCTCACCAAGCTCCCAGGGGGCCTGTTCAACATGA
ACCAGCTGCTAGCCAATGAAATCAAACTACTGGTGGACTGA
ATGTGTAGTTCTGTGGCTGCCAAGTTGTGGTTTTTGACAGATCGTCGCATCAGGGAAGACTATCCTCAAAAAGAGATTTT
ACGAGCATTGAAGGCCAAATGTTGTGAGGAGGAACTGGACTTTAGGGCTGTGGTGATGGATGAGGTGGTGCTGACAATCG
AGCAAGGAAACCTGGGTCTGCGGATCAATGGAGAGCTAATCACTGCCTACCCACAAGTGGTGGTAGTCAGAGTACCAACC
CCTTGGGTGCAAAGTGATAGTGACATCACTGTTTTGCGCCATCTAGAGAAGATGGGATGTCGGTTAATGAACCGACCTCA
AGCCATCCTGAACTGCGTTAATAAGTTCTGGACATTTCAAGAGTTGGCTGGCCATGGTGTTCCTCTGCCGGATACTTTCT
CTTATGGTGGCCACGAAAATTTTGCTAAAATGATTGATGAGGCTGAAGTTCTGGAGTTCCCAATGGTAGTAAAGAATACG
CGGGGTCACAGAGGTAAAGCTGTTTTCTTGGCTCGAGATAAGCACCATTTGGCTGATCTAAGCCATCTTATTCGCCATGA
AGCGCCATACCTGTTCCAGAAGTATGTTAAAGAGTCTCATGGACGGGATGTACGTGTCATTGTCGTGGGAGGCCGTGTGG
TTGGCACCATGTTACGTTGTTCAACAGATGGGAGAATGCAAAGCAACTGCTCATTAGGTGGTGTGGGGATGATGTGCTCA
TTGAGTGAACAAGGGAAGCAGCTAGCTATCCAGGTGTCTAATATCCTGGGGATGGATGTGTGTGGCATTGATCTGCTGAT
GAAAGATGACGGCTCCTTCTGCGTCTGTGAGGCCAATGCAAATGTAGGTTTCATCGCCTTTGATAAGGCTTGTAATCTAG
ATGTAGCTGGTATCATAGCAGACTATGCCGCCTCCCTTCTACCCTCTGGCCGGCTCACCCGGCGTATGTCCCTGCTCTCC
GTGGTGTCCACTGCCAGTGAGACTAGTGAGCCGGAGCTGGGTCCCCCAGCCAGCACTGCTGTTGACAACATGAGTGCAAG
TTCCAGCTCTGTTGACAGCGACCCTGAAAGCACGGAGCGAGAGCTGCTCACCAAGCTCCCAGGGGGCCTGTTCAACATGA
ACCAGCTGCTAGCCAATGAAATCAAACTACTGGTGGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 3 .19 RPM |
| bodymap2_lung | 63 .54 RPM |
| bodymap2_breast | 67 .72 RPM |
| bodymap2_adipose | 230 .92 RPM |
| bodymap2_adrenal | 57 .25 RPM |
| bodymap2_skeletal_muscle | 9 .71 RPM |
| bodymap2_thyroid | 65 .70 RPM |
| bodymap2_prostate | 39 .26 RPM |
| bodymap2_colon | 34 .63 RPM |
| bodymap2_testis | 85 .01 RPM |
| bodymap2_brain | 53 .96 RPM |
| bodymap2_heart | 18 .55 RPM |
| bodymap2_white_blood_cells | 3 .41 RPM |
| bodymap2_lymph_node | 27 .70 RPM |
| bodymap2_ovary | 77 .94 RPM |
| bodymap2_kidney | 34 .27 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gorilla gorilla | ENSGGOG00000000332 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000013997 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011440 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000004244 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000004643 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000023814 | possible_ortholog | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000003996 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2506 | 92.75 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000166532 retrocopies