Parental gene:

SUCLA2, ENSG00000136143

Aliases:SUCLA2, A-BETA, MTDPS5, SCS-betaA
Description:succinate-CoA ligase, ADP-forming, beta subunit [Source:HGNC Symbol;Acc:11448]
Organism:Human (Homo sapiens)
Coordinates:13:48510621..48612125(-)


>ENSG00000136143
ATGGCGGCCTCCATGTTCTACGGCAGGCTAGTGGCCGTGGCCACCCTTCGGAACCACCGGCCTCGGACGGCCCAGCGGGC
TGCTGCTCAGGTTCTGGGAAGTTCTGGATTGTTTAATAACCATGGACTCCAAGTACAGCAGCAACAGCAAAGGAATCTCT
CACTACATGAATACATGAGTATGGAATTATTGCAAGAAGCTGGTGTCTCCGTTCCCAAAGGATATGTGGCAAAGTCACCA
GATGAAGCTTATGCAATTGCCAAAAAATTAGGTTCAAAAGATGTCGTGATAAAGGCACAGGTTTTAGCTGGTGGTAGAGG
AAAAGGAACATTTGAAAGTGGCCTCAAAGGAGGAGTGAAGATAGTTTTCTCTCCAGAAGAAGCAAAAGCTGTTTCTTCAC
AAATGATTGGGAAAAAATTGTTTACCAAGCAAACGGGAGAAAAGGGCAGAATATGCAATCAAGTATTGGTCTGTGAGCGA
AAATATCCCAGGAGAGAATACTACTTTGCAATAACAATGGAAAGGTCATTTCAAGGTCCTGTATTAATAGGAAGTTCACA
TGGTGGTGTCAACATTGAAGATGTTGCTGCTGAGTCTCCTGAAGCAATAATTAAAGAACCTATTGATATTGAAGAAGGCA
TCAAAAAGGAACAAGCTCTCCAGCTTGCACAGAAGATGGGATTTCCACCTAATATTGTGGAATCAGCAGCAGAAAACATG
GTCAAGCTTTACAGCCTTTTTCTGAAATACGATGCAACCATGATAGAAATAAATCCAATGGTGGAAGATTCAGATGGAGC
TGTATTGTGTATGGATGCAAAGATCAATTTTGACTCTAATTCAGCCTATCGCCAAAAGAAAATCTTTGATCTACAGGACT
GGACCCAGGAAGATGAAAGGGACAAAGATGCTGCTAAGGCAAATCTCAACTACATTGGCCTCGATGGAAATATAGGCTGC
CTAGTAAATGGTGCTGGTTTGGCTATGGCCACAATGGATATAATAAAACTTCATGGAGGGACTCCAGCCAACTTCCTTGA
TGTTGGTGGTGGTGCTACAGTCCATCAAGTAACAGAAGCATTTAAGCTTATCACTTCAGATAAAAAGGTACTGGCTATTC
TGGTCAACATTTTTGGAGGAATCATGCGCTGTGATGTTATTGCACAGGGTATAGTCATGGCAGTAAAAGACTTGGAAATT
AAAATACCTGTTGTGGTACGGTTACAAGGTACACGAGTCGATGATGCTAAGGCACTGATAGCGGACAGTGGACTTAAAAT
ACTTGCTTGTGATGACTTGGATGAAGCTGCTAGAATGGTTGTAAAGCTCTCTGAAATAGTGACCTTAGCGAAGCAAGCAC
ATGTGGATGTGAAATTTCAGTTGCCAATATGA

Library Parental gene expression (RPM)
bodymap2_adipose 40 .57 RPM
bodymap2_adrenal 32 .73 RPM
bodymap2_brain 119 .38 RPM
bodymap2_breast 114 .24 RPM
bodymap2_colon 65 .70 RPM
bodymap2_heart 144 .18 RPM
bodymap2_kidney 87 .23 RPM
bodymap2_liver 19 .37 RPM
bodymap2_lung 27 .50 RPM
bodymap2_lymph_node 29 .51 RPM
bodymap2_ovary 54 .82 RPM
bodymap2_prostate 60 .95 RPM
bodymap2_skeletal_muscle 68 .11 RPM
bodymap2_testis 56 .09 RPM
bodymap2_thyroid 79 .37 RPM
bodymap2_white_blood_cells 26 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000014610 ortholog_one2one 2 retrogenes
retro_acar_26, retro_acar_52,
Callithrix jacchus ENSCJAG00000009278 ortholog_one2one 2 retrogenes
retro_cjac_1233, retro_cjac_2379,
Cavia porcellus ENSCPOG00000014961 ortholog_one2one 1 retrogene
retro_cpor_1113,
Homo sapiens ENSG00000172340 within_species_paralog 1 retrogene
retro_hsap_1044,
Gorilla gorilla ENSGGOG00000008224 ortholog_one2one 3 retrogenes
retro_ggor_1668, retro_ggor_1694, retro_ggor_2327,
Macaca mulatta ENSMMUG00000007539 ortholog_one2one 1 retrogene
retro_mmul_1231,
Mustela putorius furo ENSMPUG00000001488 ortholog_one2one 1 retrogene
retro_mputfur_768,
Nomascus leucogenys ENSNLEG00000002948 ortholog_one2one 3 retrogenes
retro_nleu_1963, retro_nleu_2140, retro_nleu_2302,
Otolemur garnettii ENSOGAG00000007452 ortholog_one2one 1 retrogene
retro_ogar_2196,
Pongo abelii ENSPPYG00000005352 ortholog_one2one 2 retrogenes
retro_pabe_1939, retro_pabe_2852,
Pan troglodytes ENSPTRG00000005859 ortholog_one2one 3 retrogenes
retro_ptro_1581, retro_ptro_1615, retro_ptro_2337,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2236 84.46 83.22
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2. retro_hsap_2281 72.00 75.16
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3. retro_hsap_3445 87.70 93.09
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Download FASTA sequences of all ENSG00000136143 retrocopies