Parental gene: | ARF1, ENSGGOG00000011263 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 1:208294809..208311376(+) |
>ENSGGOG00000011263
ATGGGGAACATCTTCGCCAACCTCTTCAAGGGCCTTTTTGGCAAAAAAGAAATGCGCATCCTCATGGTGGGCCTGGATGC
TGCAGGGAAGACCACGATCCTCTACAAGCTTAAGCTGGGTGAGATCGTGACCACCATTCCCACCATAGGCTTCAACGTGG
AAACCGTGGAGTACAAGAACATCAGCTTCACTGTGTGGGACGTGGGTGGCCAGGACAAGATCCGGCCCCTGTGGCGCCAC
TACTTCCAGAACACACAAGGCCTGATCTTCGTGGTGGACAGCAATGACAGAGAGCGTGTGAACGAGGCCCGTGAGGAGCT
CATGAGGATGCTGGCCGAGGACGAGCTCCGGGATGCTGTCCTCCTCGTGTTCGCCAACAAGCAGGACCTCCCCAACGCCA
TGAATGCGGCCGAGATCACAGACAAGCTGGGGCTGCACTCCCTACGCCACAGGAACTGGTACATTCAGGCCACCTGCGCC
ACCAGCGGCGATGGGCTCTATGAAGGACTGGACTGGCTGTCCAATCAGCTCCGGAACCAGAAGTGA
ATGGGGAACATCTTCGCCAACCTCTTCAAGGGCCTTTTTGGCAAAAAAGAAATGCGCATCCTCATGGTGGGCCTGGATGC
TGCAGGGAAGACCACGATCCTCTACAAGCTTAAGCTGGGTGAGATCGTGACCACCATTCCCACCATAGGCTTCAACGTGG
AAACCGTGGAGTACAAGAACATCAGCTTCACTGTGTGGGACGTGGGTGGCCAGGACAAGATCCGGCCCCTGTGGCGCCAC
TACTTCCAGAACACACAAGGCCTGATCTTCGTGGTGGACAGCAATGACAGAGAGCGTGTGAACGAGGCCCGTGAGGAGCT
CATGAGGATGCTGGCCGAGGACGAGCTCCGGGATGCTGTCCTCCTCGTGTTCGCCAACAAGCAGGACCTCCCCAACGCCA
TGAATGCGGCCGAGATCACAGACAAGCTGGGGCTGCACTCCCTACGCCACAGGAACTGGTACATTCAGGCCACCTGCGCC
ACCAGCGGCGATGGGCTCTATGAAGGACTGGACTGGCTGTCCAATCAGCTCCGGAACCAGAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 217 .85 RPM |
| SRP007412_cerebellum | 174 .61 RPM |
| SRP007412_heart | 116 .73 RPM |
| SRP007412_kidney | 196 .80 RPM |
| SRP007412_liver | 170 .85 RPM |
| SRP007412_testis | 303 .65 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016671 | possible_ortholog | 10 retrogenes | |
| Cavia porcellus | ENSCPOG00000021174 | ortholog_one2one | 1 retrogene | |
| Ciona savignyi | ENSCSAVG00000007011 | possible_ortholog | 1 retrogene | |
| Felis catus | ENSFCAG00000029374 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000143761 | ortholog_one2one | 3 retrogenes | |
| Gallus gallus | ENSGALG00000005393 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000000294 | within_species_paralog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000004952 | other_paralog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000016749 | within_species_paralog | 1 retrogene | |
| Latimeria chalumnae | ENSLACG00000019009 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000007020 | possible_ortholog | 6 retrogenes | |
| Mus musculus | ENSMUSG00000048076 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000023645 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000002066 | possible_ortholog | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000009218 | ortholog_one2one | 9 retrogenes | |
| Tetraodon nigroviridis | ENSTNIG00000011685 | possible_ortholog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000014186 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_161 | 70.83 | 92.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_801 | 71.43 | 69.06 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_906 | 80.56 | 98.90 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_2531 | 74.18 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ggor_3071 | 71.43 | 69.06 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000011263 retrocopies