Parental gene:

HSPA9, ENSGGOG00000014154

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:5:122092266..122113453(-)


>ENSGGOG00000014154
TCCGCCATGATAAGTGCTAGCCGAGCTGCAGCAGCCCGTTTCGTGGGCGCCGCAGCCTCCCGGGGCCCTACGGCCGCCCG
CCACCAGGATAGCTGGAATGGCCTTAGTCATGAGGCTTTTAGAATTGTTTCAAGGCGGGATTATGCATCAGAAGCAATCA
AGGGAGCAGTTGTTGGTATTGATTTGGGTACTACCAACTCCTGCGTGGCAGTTATGGAAGGTAAACAAGCAAAGGTGCTG
GAGAATGCCGAAGGTGCCAGAACCACCCCTTCAGTTGTGGCCTTTACAGCAGATGGTGAGCGACTTGTTGGAATGCCGGC
CAAGCGACAGGCTGTCACCAACCCAAACAATACATTTTATGCTACCAAGCGTCTCATTGGCCGGCGATATGATGATCCTG
AAGTACAGAAAGACATTAAAAATGTTCCCTTTAAAATTGTCCGTGCCTCCAATGGTGATGCCTGGGTTGAGGCTCATGGG
AAATTGTATTCTCCGAGTCAGATTGGAGCATTTGTGTTGATGAAGATGAAAGAGACTGCAGAAAATTACTTGGGGCACAC
AGCAAAAAATGCTGTGATCACAGTCCCAGCTTATTTCAATGACTCGCAGAGACAGGCCACTAAAGATGCTGGCCAGATAT
CTGGACTGAATGTGCTTCGGGTGATTAATGAGCCCACAGCTGCTGCTCTTGCCTATGGTCTAGACAAATCAGAAGACAAA
GTCATTGCTGTATATGATTTAGGTGGTGGAACTTTTGATATTTCTATCCTGGAAATTCAGAAAGGAGTATTCGAGGTGAA
ATCCACAAATGGGGATACCTTCTTAGGTGGGGAAGACTTTGACCAGGCCTTGCTACGGCACATTGTGAAGGAGTTCAAGA
GAGAGACAGGGGTTGATTTGACTAAAGACAACATGGCACTTCAGAGGGTACGGGAAGCTGCTGAAAAGGCTAAATGTGAA
CTCTCCTCATCTGTGCAGACTGACATCAATTTGCCCTATCTTACAATGGATTCTTCTGGACCCAAGCATTTGAATATGAA
GTTGACCCGTGCTCAATTTGAAGGGATTGTCACTGATCTAATCAGGAGGACTATCGCTCCATGCCAAAAAGCTATGCAAG
ATGCAGAAGTCAGCAAGAGTGACATAGGAGAAGTGATTCTTGTGGGTGGCATGACTAGGATGCCCAAGGTTCAGCAGACT
GTACAGGATCTTTTTGGCAGAGCCCCAAGTAAAGCTGTCAATCCTGATGAGGCTGTGGCCATTGGAGCTGCCATTCAGGG
AGGTGTGTTGGCCGGCGATGTCACGGATGTGCTGCTCCTTGATGTCACTCCCCTGTCTCTGGGTATTGAAACTCTAGGAG
GTGTCTTTACCAAACTTATTAATAGGAATACCACTATTCCAACCAAGAAGAGCCAGGTATTCTCTACTGCCGCTGATGGT
CAAACGCAAGTGGAAATTAAAGTGTGTCAGGGTGAGAGAGAGATGGCTGGAGACAACAAACTCCTTGGACAGTTTACTTT
GATTGGAATTCCACCAGCCCCTCGTGGAGTTCCTCAGATTGAAGTTACATTTGACATTGATGCCAATGGGATAGTACATG
TTTCTGCTAAAGATAAAGGCACAGGACGTGAGCAGCAGATTGTAATCCAGTCTTCTGGTGGATTAAGCAAAGATGATATT
GAAAATATGGTTAAAAATGCAGAGAAATATGCTGAAGAAGACCGGCGAAAGAAGGAACGAGTTGAAGCAGTTAATATGGC
TGAAGGAATCATTCATGACACAGAAACCAAGATGGAAGAATTCAAGGACCAATTACCTGCTGATGAGTGCAACAAGCTGA
AAGAAGAGATTTCCAAAATGAGGGAGCTCCTGGCTAGAAAAGACAGCGAAACAGGAGAAAATATTAGACAGGCAGCATCC
TCTCTTCAGCAGGCATCATTGAAGCTCTTCGAAATGGCATACAAAAAGATGGCATCTGAGCGAGAAGGCTCTGGAAGTTC
TGGCACTGGGGAACAAAAGGAAGATCAAAAGGAGGAAAAACAGTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 214 .45 RPM
SRP007412_cerebellum 125 .37 RPM
SRP007412_heart 99 .06 RPM
SRP007412_kidney 332 .59 RPM
SRP007412_liver 199 .55 RPM
SRP007412_testis 246 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000013579 ortholog_one2one 2 retrogenes
retro_chof_2539, retro_chof_293,
Homo sapiens ENSG00000113013 ortholog_one2one 1 retrogene
retro_hsap_2214,
Gorilla gorilla ENSGGOG00000008381 within_species_paralog 8 retrogenes
retro_ggor_1053, retro_ggor_1810, retro_ggor_1888, retro_ggor_1918, retro_ggor_2501, retro_ggor_3054, retro_ggor_3057, retro_ggor_360,
Gorilla gorilla ENSGGOG00000026879 within_species_paralog 1 retrogene
retro_ggor_2082,
Mus musculus ENSMUSG00000024359 ortholog_one2one 1 retrogene
retro_mmus_3624,
Pan troglodytes ENSPTRG00000017290 ortholog_one2one 1 retrogene
retro_ptro_1680,
Rattus norvegicus ENSRNOG00000019525 ortholog_one2one 1 retrogene
retro_rnor_1797,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_1747 92.75 80.76
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Download FASTA sequences of all ENSGGOG00000014154 retrocopies