Parental gene:

HSPA5, ENSGGOG00000026879

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:9:108649485..108655618(-)


>ENSGGOG00000026879
AAGATGAAGCTCTCTCTGGTGGCCGCGATGCTGCTGCTGCTCAGCGCGGCGCGGGCCGAGGAGGAGGACAAGAAGGAGGA
CGTGGGCACGGTGGTCGGCATCGACCTGGGGACCACCTACTCCTGTGTCGGCGTGTTCAAGAACGGCCGCGTGGAGATCA
TCGCCAACGATCAGGGCAACCGCATCACGCCGTCCTATGTGGCCTTCACTCCTGAAGGGGAACGTCTGATTGGCGATGCC
GCCAAGAACCAGCTCACCTCCAACCCCGAGAACACGGTCTTTGACGCCAAGCGGCTCATCGGCCGCACGTGGAATGACCC
GTCTGTGCAGCAGGACATCAAGTTCTTGCCGTTCAAGGTGGTTGAAAAGAAAACTAAACCATACATTCAAGTTGATATTG
GAGGTGGGCAAACTAAGACATTTGCTCCTGAAGAAATTTCTGCCATGGTTCTCACTAAAATGAAAGAAACCGCTGAGGCT
TATTTGGGAAAGAAGGTTACCCATGCAGTTGTTACTGTACCAGCCTATTTTAATGATGCCCAACGCCAAGCAACCAAAGA
CGCTGGAACTATTGCTGGCCTAAATGTTATGAGGATCATCAACGAGCCTACGGCAGCTGCTATTGCTTATGGCCTGGATA
AGAGGGAGGGGGAGAAGAACATCCTGGTGTTTGACCTGGGTGGCGGAACCTTCGATGTGTCTCTTCTCACCATTGACAAT
GGTGTCTTCGAAGTTGTGGCCACTAATGGAGATACTCATCTGGGTGGAGAAGACTTTGACCAGCGTGTCATGGAACACTT
CATCAAACTGTACAAAAAGAAGACTGGCAAAGATGTCAGGAAAGACAATAGAGCTGTGCAGAAACTCCGGCGCGAGGTAG
AAAAGGCCAAACGGGCCCTGTCTTCTCAACATCAAGCAAGAATTGAAATTGAGTCCTTCTATGAAGGAGAAGACTTTTCT
GAGACCCTGACTCGGGCCAAATTTGAAGAGCTCAACATGGATCTGTTCCGGTCTACTATGAAGCCCGTCCAGAAAGTGTT
GGAAGATTCTGATTTGAAGAAGTCTGATATTGATGAAATTGTTCTTGTTGGTGGCTCGACTCGAATTCCAAAGATTCAGC
AACTGGTTAAAGAGTTCTTCAATGGCAAGGAACCATCCCGTGGCATAAACCCAGATGAAGCTGTAGCGTATGGTGCTGCT
GTCCAGGCTGGTGTGCTCTCTGGTGATCAAGATACAGGTGACCTGGTACTGCTTGATGTATGTCCCCTTACACTTGGTAT
TGAAACTGTGGGAGGTGTCATGACCAAACTGATTCCAAGGAACACAGTGGTGCCTACCAAGAAGTCTCAGATCTTTTCTA
CAGCTTCTGATAATCAACCAACTGTTACAATCAAGGTCTATGAAGGTGAAAGACCCCTGACAAAAGATAATCATCTTCTG
GGTACATTTGATCTGACTGGAATTCCTCCTGCTCCTCGTGGGGTCCCACAGATTGAAGTCACCTTTGAGATAGATGTGAA
TGGTATTCTTCGAGTGACAGCTGAAGACAAGGGTACAGGGAACAAAAATAAGATCACAATCACCAATGACCAGAATCGCC
TGACACCTGAAGAAATCGAAAGGATGGTTAATGATGCTGAGAAGTTTGCTGAGGAAGACAAAAAGCTCAAGGAGCGCATT
GATACTAGAAATGAGTTGGAAAGCTATGCCTATTCTCTAAAGAATCAGATTGGAGATAAAGAAAAGCTGGGAGGTAAACT
TTCCTCTGAAGATAAGGAGACCATGGAAAAAGCTGTAGAAGAAAAGATTGAATGGCTTGAAAGCCACCAAGATGCTGACA
TTGAAGACTTCAAAGCTAAGAAGAAGGAACTGGAAGAAATTGTTCAACCAATTATCAGCAAACTCTATGGAAGTGCAGGC
CCTCCCCCAACTGGTGAAGAGGATACAGCAGAAAAAGATGAGTTGTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 127 .27 RPM
SRP007412_cerebellum 88 .88 RPM
SRP007412_heart 72 .80 RPM
SRP007412_kidney 410 .81 RPM
SRP007412_liver 288 .71 RPM
SRP007412_testis 419 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006880 ortholog_one2one 1 retrogene
retro_cjac_2221,
Homo sapiens ENSG00000044574 ortholog_one2one 1 retrogene
retro_hsap_3005,
Gallus gallus ENSGALG00000001000 ortholog_one2one 1 retrogene
retro_ggal_21,
Gorilla gorilla ENSGGOG00000008381 within_species_paralog 8 retrogenes
retro_ggor_1053, retro_ggor_1810, retro_ggor_1888, retro_ggor_1918, retro_ggor_2501, retro_ggor_3054, retro_ggor_3057, retro_ggor_360,
Gorilla gorilla ENSGGOG00000014154 within_species_paralog 1 retrogene
retro_ggor_1747,
Macropus eugenii ENSMEUG00000016702 ortholog_one2one 1 retrogene
retro_meug_522,
Mus musculus ENSMUSG00000026864 ortholog_one2one 1 retrogene
retro_mmus_1299,
Nomascus leucogenys ENSNLEG00000017348 ortholog_one2one 1 retrogene
retro_nleu_751,
Otolemur garnettii ENSOGAG00000006786 ortholog_one2one 1 retrogene
retro_ogar_2901,
Pongo abelii ENSPPYG00000019609 ortholog_one2one 1 retrogene
retro_pabe_2491,
Pan troglodytes ENSPTRG00000000563 ortholog_one2one 1 retrogene
retro_ptro_2033,
Ictidomys tridecemlineatus ENSSTOG00000011243 ortholog_one2one 4 retrogenes
retro_itri_1686, retro_itri_1687, retro_itri_1689, retro_itri_1879,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_2082 86.32 100.00
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Download FASTA sequences of all ENSGGOG00000026879 retrocopies