Parental gene:

CNOT7, ENSMMUG00000001873

Aliases:None
Description:CCR4-NOT transcription complex subunit 7 [Source:RefSeq peptide;Acc:NP_001253776]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:8:17098891..17116580(-)


>ENSMMUG00000001873
ATGCCAGCGGCAACTGTAGATCATAGCCAAAGAATTTGTGAAGTTTGGGCTTGCAACTTGGATGAAGAGATGAAGAAAAT
TCGTCAAGTTATCCGAAAATATAATTACGTTGCTATGGACACCGAGTTTCCAGGTGTGGTTGCAAGACCCATTGGAGAAT
TCAGGAGCAATGCTGACTATCAATACCAACTATTGCGGTGTAATGTAGACTTATTAAAGATAATTCAGCTAGGACTGACA
TTTATGAATGAGCAAGGAGAATACCCTCCAGGAACTTCAACTTGGCAGTTTAATTTTAAATTTAATTTGACGGAGGATAT
GTATGCCCAGGACTCTATAGAGCTACTAACAACATCTGGTATCCAGTTTAAAAAACATGAGGAGGAAGGAATTGAGACCC
AGTACTTTGCAGAACTTCTTATGACTTCTGGAGTGGTCCTCTGTGAAGGGGTCAAATGGTTGTCATTTCATAGTGGTTAC
GACTTTGGCTACTTAATCAAAATCCTAACCAACTCTAACTTGCCTGAAGAAGAACTTGACTTCTTTGAGATCCTTCGATT
GTTTTTTCCTGTAATTTATGATGTGAAGTACCTCATGAAGAGCTGCAAAAATCTCAAAGGTGGATTACAGGAGGTGGCAG
AACAGTTAGAGCTGGAACGGATAGGACCACAACATCAGGCAGGATCTGATTCATTGCTCACAGGAATGGCCTTTTTCAAA
ATGAGAGAAATGTTCTTTGAAGATCATATTGATGATGCCAAATATTGTGGTCATTTGTATGGCCTTGGTTCTGGTTCATC
CTATGTACAGAATGGCACAGGGAATGCATATGAAGAGGAAGCCAACAAGCAGTCATGA

Library Parental gene expression (RPM)
SRP007412_brain 52 .33 RPM
SRP007412_brain_prefrontal_cortex 34 .43 RPM
SRP007412_cerebellum 48 .75 RPM
SRP007412_heart 20 .02 RPM
SRP007412_kidney 34 .15 RPM
SRP007412_liver 13 .02 RPM
SRP007412_testis 45 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000677 ortholog_one2one 4 retrogenes
retro_chof_1431, retro_chof_1581, retro_chof_822, retro_chof_963,
Callithrix jacchus ENSCJAG00000011795 possible_ortholog 1 retrogene
retro_cjac_720,
Felis catus ENSFCAG00000000591 ortholog_one2one 1 retrogene
retro_fcat_1889,
Homo sapiens ENSG00000198791 ortholog_one2one 2 retrogenes
retro_hsap_211, retro_hsap_4851,
Mustela putorius furo ENSMPUG00000017972 ortholog_one2one 1 retrogene
retro_mputfur_1596,
Nomascus leucogenys ENSNLEG00000002489 ortholog_one2one 2 retrogenes
retro_nleu_1860, retro_nleu_2373,
Oryctolagus cuniculus ENSOCUG00000014589 ortholog_one2many 1 retrogene
retro_ocun_118,
Otolemur garnettii ENSOGAG00000006324 ortholog_one2one 2 retrogenes
retro_ogar_1883, retro_ogar_505,
Pongo abelii ENSPPYG00000018385 ortholog_one2one 2 retrogenes
retro_pabe_3771, retro_pabe_428,
Sarcophilus harrisii ENSSHAG00000011828 possible_ortholog 2 retrogenes
retro_shar_103, retro_shar_631,
Ictidomys tridecemlineatus ENSSTOG00000009175 ortholog_one2one 2 retrogenes
retro_itri_1729, retro_itri_1730,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2592 91.19 91.23
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Download FASTA sequences of all ENSMMUG00000001873 retrocopies