Parental gene:

ENSSHAG00000011828

Aliases:None
Description:None
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL864737.1:915516..936551(+)


>ENSSHAG00000011828
ATGCCAGCAGCGACTGTAGATCATAGCCAAAGAATTTGTGAAGTTTGGGCTTGCAACCTGGATGACGAGATGAAGAAAAT
TCGTCAAGTTATACGGAAGTATAATTATGTTGCCATGGACACCGAGTTTCCAGGTGTGGTTGCAAGACCCATTGGAGAAT
TCAGAAGTAATGCTGACTATCAGTACCAACTATTGAGATGTAATGTAGACTTGCTAAAGATAATTCAGCTTGGGTTAACA
TTTATGAATGAGCAAGGAGAATACCCTCCAGGAACTTCAACATGGCAGTTCAATTTCAAGTTTAATTTAACGGAAGACAT
GTATGCCCAGGACTCTATAGAGCTCCTAACAACCTCGGGAATTCAGTTTAAAAAACACGAGGAAGAAGGGATTGAAACAC
AATATTTTGCAGAACTTCTCATGACATCAGGTGTCGTGTTGTGTGAGGGAGTCAAGTGGCTTTCATTTCACAGTGGTTAT
GACTTTGGCTATTTAATCAAAATCCTGACCAACTCTAATTTGCCTGAAGAAGAGCTGGACTTTTTTGAGATTCTCCGATT
GTTCTTTCCAGTCATCTATGATGTTAAGTACCTCATGAAGAGCTGCAAAAACCTCAAGGGTGGCTTACAGGAAGTGGCTG
AGCAGCTGGAGTTGGAGCGGATAGGACCACAGCACCAGGCAGGATCCGATTCATTACTGACAGGAATGGCCTTTTTCAAA
ATGAGAGAAATGTTCTTTGAAGATCACATCGATGATGCCAAGTATTGTGGGCACTTGTACGGCCTTGGTTCGGGCTCCTC
CTATGTGCAGAACGGTACGGGGAATGCGTATGAAGAGGAAGCCAGCAAGCAGTCATGA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000000677 ortholog_one2many 4 retrogenes
retro_chof_1431, retro_chof_1581, retro_chof_822, retro_chof_963,
Callithrix jacchus ENSCJAG00000011795 ortholog_one2many 1 retrogene
retro_cjac_720,
Felis catus ENSFCAG00000000591 possible_ortholog 1 retrogene
retro_fcat_1889,
Homo sapiens ENSG00000198791 possible_ortholog 2 retrogenes
retro_hsap_211, retro_hsap_4851,
Gorilla gorilla ENSGGOG00000015762 ortholog_one2one 2 retrogenes
retro_ggor_282, retro_ggor_3027,
Macaca mulatta ENSMMUG00000001873 possible_ortholog 1 retrogene
retro_mmul_2592,
Monodelphis domestica ENSMODG00000019055 ortholog_one2one 2 retrogenes
retro_mdom_1898, retro_mdom_802,
Mustela putorius furo ENSMPUG00000017972 possible_ortholog 1 retrogene
retro_mputfur_1596,
Nomascus leucogenys ENSNLEG00000002489 possible_ortholog 2 retrogenes
retro_nleu_1860, retro_nleu_2373,
Oryctolagus cuniculus ENSOCUG00000014589 possible_ortholog 1 retrogene
retro_ocun_118,
Otolemur garnettii ENSOGAG00000006324 possible_ortholog 2 retrogenes
retro_ogar_1883, retro_ogar_505,
Pongo abelii ENSPPYG00000018385 possible_ortholog 2 retrogenes
retro_pabe_3771, retro_pabe_428,
Ictidomys tridecemlineatus ENSSTOG00000009175 possible_ortholog 2 retrogenes
retro_itri_1729, retro_itri_1730,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_103 94.12 53.68
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2. retro_shar_631 79.07 89.82
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Download FASTA sequences of all ENSSHAG00000011828 retrocopies