Parental gene: | SPOPL, ENSMMUG00000002560 |
| Aliases: | None |
| Description: | speckle-type POZ protein-like [Source:RefSeq peptide;Acc:NP_001253311] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 12:2002026..2024963(+) |
>ENSMMUG00000002560
ATGTCTCGGGAACCCACCCCACCTCTACCTGGAGATATGTCTACTGGTCCCATAGCAGAAAGCTGGTGTTACACACAGGT
TAAAGTAGTAAAATTTTCCTACATGTGGACCATTAATAACTTCAGTTTTTGTCGAGAGGAAATGGGTGAAGTGTTAAAAA
GTTCTACATTTTCATCTGGCCCAAGTGACAAAATGAAATGGTGCCTGAGGGTAAACCCAAAGGGATTAGATGATGAAAGT
AAAGACTACTTGTCCTTGTATTTGCTTTTAGTCAGCTGTCCCAAAAGTGAAGTTCGAGCAAAATTCAAATTTTCCCTTCT
GAATGCTAAAAGGGAAGAAACAAAAGCAATGGAAAGCCAAAGAGCATATCGATTTGTGCAAGGGAAGGACTGGGGTTTTA
AAAAATTCATTAGAAGGGACTTTTTGCTTGACGAAGCTAATGGTCTTTTACCAGATGACAAGCTTACCTTATTTTGTGAG
GTGAGTGTGGTCCAAGATTCAGTAAACATATCAGGACATACTAATACAAATACTTTGAAGGTGCCTGAGTGTCGTCTAGC
AGAAGATTTAGGTAATCTCTGGGAAAACACAAGATTTACAGACTGCAGTTTTTTCGTGAGAGGACAAGAATTTAAAGCTC
ATAAATCTGTGCTTGCAGCTCGATCCCCAGTTTTTAACGCCATGTTTGAACACGAAATGGAAGAAAGCAAAAAGAATCAA
GTGGAAATAAATGATTTAGACCCTGAAGTTTTTAAAGAAATGATGAGGTTCATTTACACAGGGAGAGCACCAAACCTTGA
CAAAATGGCTGACAACTTGTTGGCAGCTGCAGACAAATATGCACTGGAACGGCTGAAGGTCATGTGCGAAGAAGCTTTGT
GTAGTAACCTCTCAGTAGAGAATGTTGCGGATACCCTTGTCCTTGCAGATTTGCACAGTGCAGAACAGTTGAAAGCACAA
GCCATAGACTTTATTAATAGGTGCAGTGTACTGCGACAACTTGGGTGTAAAGATGGGAAAAACTGGAACAGCAACCAAGC
AACCGACATAATGGAAACATCGGGGTGGAAGTCCATGATTCAGTCTCACCCTCATTTAGTAGCAGAAGCCTTTCGAGCAC
TAGCATCTGCACAGTGTCCACAGTTTGGCATTCCACGCAAACGGCTAAAACAGTCCTGA
ATGTCTCGGGAACCCACCCCACCTCTACCTGGAGATATGTCTACTGGTCCCATAGCAGAAAGCTGGTGTTACACACAGGT
TAAAGTAGTAAAATTTTCCTACATGTGGACCATTAATAACTTCAGTTTTTGTCGAGAGGAAATGGGTGAAGTGTTAAAAA
GTTCTACATTTTCATCTGGCCCAAGTGACAAAATGAAATGGTGCCTGAGGGTAAACCCAAAGGGATTAGATGATGAAAGT
AAAGACTACTTGTCCTTGTATTTGCTTTTAGTCAGCTGTCCCAAAAGTGAAGTTCGAGCAAAATTCAAATTTTCCCTTCT
GAATGCTAAAAGGGAAGAAACAAAAGCAATGGAAAGCCAAAGAGCATATCGATTTGTGCAAGGGAAGGACTGGGGTTTTA
AAAAATTCATTAGAAGGGACTTTTTGCTTGACGAAGCTAATGGTCTTTTACCAGATGACAAGCTTACCTTATTTTGTGAG
GTGAGTGTGGTCCAAGATTCAGTAAACATATCAGGACATACTAATACAAATACTTTGAAGGTGCCTGAGTGTCGTCTAGC
AGAAGATTTAGGTAATCTCTGGGAAAACACAAGATTTACAGACTGCAGTTTTTTCGTGAGAGGACAAGAATTTAAAGCTC
ATAAATCTGTGCTTGCAGCTCGATCCCCAGTTTTTAACGCCATGTTTGAACACGAAATGGAAGAAAGCAAAAAGAATCAA
GTGGAAATAAATGATTTAGACCCTGAAGTTTTTAAAGAAATGATGAGGTTCATTTACACAGGGAGAGCACCAAACCTTGA
CAAAATGGCTGACAACTTGTTGGCAGCTGCAGACAAATATGCACTGGAACGGCTGAAGGTCATGTGCGAAGAAGCTTTGT
GTAGTAACCTCTCAGTAGAGAATGTTGCGGATACCCTTGTCCTTGCAGATTTGCACAGTGCAGAACAGTTGAAAGCACAA
GCCATAGACTTTATTAATAGGTGCAGTGTACTGCGACAACTTGGGTGTAAAGATGGGAAAAACTGGAACAGCAACCAAGC
AACCGACATAATGGAAACATCGGGGTGGAAGTCCATGATTCAGTCTCACCCTCATTTAGTAGCAGAAGCCTTTCGAGCAC
TAGCATCTGCACAGTGTCCACAGTTTGGCATTCCACGCAAACGGCTAAAACAGTCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 14 .04 RPM |
| SRP007412_brain | 25 .32 RPM |
| SRP007412_cerebellum | 27 .70 RPM |
| SRP007412_heart | 11 .25 RPM |
| SRP007412_kidney | 9 .98 RPM |
| SRP007412_liver | 3 .60 RPM |
| SRP007412_testis | 5 .35 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000014763 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000144228 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016285 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013800 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000006944 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000012825 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000012504 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_1884 | 72.94 | 85.46 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1885 | 80.00 | 77.30 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000002560 retrocopies