Parental gene: | GYG1, ENSMMUG00000005521 |
| Aliases: | None |
| Description: | None |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 2:138765567..138802020(-) |
>ENSMMUG00000005521
ATGACAGATCAGGCCTTTGTGACACTGACCACAAACGATGCCTATGCCAAAGGTGCCCTGGTCCTGGGCTCATCTCTGAA
ACAGCACAGGACCACCAGGAGGCTGGTTGTGCTCGCTACTCCTCAGGTCTCAGACTCCATGAGAAAAGTTTTAGAGACAG
TCTTCGATGAAGTCATCATGGTAGATGTCTTGGACAGTGGCGATTCTGCTCATCTAACCTTAATGAAGAGGCCAGAGTTG
GGTGTCACACTGACAAAGCTCCACTGCTGGTCACTTACACAGTATTCAAAATGTGTATTCATGGATGCAGATACTCTGGT
CCTAGCAAATATTGATGATCTTTTTGAGAGAGAAGAATTGTCAGCAGCACCAGACCCAGGGTGGCCTGACTGCTTCAATT
CCGGAGTCTTCGTTTATCAGCCTTCAGTTGAAACATATAATCAGCTGTTGCGTCTTGCTTCTGAGCAAGGTAGTTTTGAT
GGTGGGGACCAAGGCATACTGAACACATTTTTTAGTAGCTGGGCAACAAGAGATATCAGAAAACACCTGCCCTTTATTTA
TAACCTCAGCAGCATCTCTATATACTCCTACCTCCCAGCATTTAAAGTGTTTGGTGCAAGTGCCAAAGTTGTGCATTTCC
TGGGACGAGTCAAACCATGGAATTATACTTATGATCCCAAAACAAAAAGTGTCAAAAGTGAGGCCCATGATCCGAACATG
ACTCATCCAGAGTTTCTCATCCTGTGGTGGAACATCTTTACCACCAACGTTTTACCTCTGCTTCAACAATTTGGCCTTGT
CAAAGACACCTGCTCATATGTAAATGTGCTTTCAGACTTGGTCTATACACTGGCTTTCTCTTGTGGCTTCTGTAGAAAGG
AAGATGTCTCAGGAGCCATATCACATCTGTCCCTTGGGGAGATCCCAGCTATGGCACAGCCATTTGTATCCTCGGAAGAA
CGGAAGGAGCGATGGGAACAGGGCCAGGCTGATTATATGGGAGCAGATTCCTTTGACAACATCAAGAGGAAACTTGACAC
TTACCTCCAGTAG
ATGACAGATCAGGCCTTTGTGACACTGACCACAAACGATGCCTATGCCAAAGGTGCCCTGGTCCTGGGCTCATCTCTGAA
ACAGCACAGGACCACCAGGAGGCTGGTTGTGCTCGCTACTCCTCAGGTCTCAGACTCCATGAGAAAAGTTTTAGAGACAG
TCTTCGATGAAGTCATCATGGTAGATGTCTTGGACAGTGGCGATTCTGCTCATCTAACCTTAATGAAGAGGCCAGAGTTG
GGTGTCACACTGACAAAGCTCCACTGCTGGTCACTTACACAGTATTCAAAATGTGTATTCATGGATGCAGATACTCTGGT
CCTAGCAAATATTGATGATCTTTTTGAGAGAGAAGAATTGTCAGCAGCACCAGACCCAGGGTGGCCTGACTGCTTCAATT
CCGGAGTCTTCGTTTATCAGCCTTCAGTTGAAACATATAATCAGCTGTTGCGTCTTGCTTCTGAGCAAGGTAGTTTTGAT
GGTGGGGACCAAGGCATACTGAACACATTTTTTAGTAGCTGGGCAACAAGAGATATCAGAAAACACCTGCCCTTTATTTA
TAACCTCAGCAGCATCTCTATATACTCCTACCTCCCAGCATTTAAAGTGTTTGGTGCAAGTGCCAAAGTTGTGCATTTCC
TGGGACGAGTCAAACCATGGAATTATACTTATGATCCCAAAACAAAAAGTGTCAAAAGTGAGGCCCATGATCCGAACATG
ACTCATCCAGAGTTTCTCATCCTGTGGTGGAACATCTTTACCACCAACGTTTTACCTCTGCTTCAACAATTTGGCCTTGT
CAAAGACACCTGCTCATATGTAAATGTGCTTTCAGACTTGGTCTATACACTGGCTTTCTCTTGTGGCTTCTGTAGAAAGG
AAGATGTCTCAGGAGCCATATCACATCTGTCCCTTGGGGAGATCCCAGCTATGGCACAGCCATTTGTATCCTCGGAAGAA
CGGAAGGAGCGATGGGAACAGGGCCAGGCTGATTATATGGGAGCAGATTCCTTTGACAACATCAAGAGGAAACTTGACAC
TTACCTCCAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 30 .86 RPM |
| SRP007412_brain | 35 .30 RPM |
| SRP007412_cerebellum | 41 .20 RPM |
| SRP007412_heart | 41 .22 RPM |
| SRP007412_kidney | 30 .52 RPM |
| SRP007412_liver | 8 .95 RPM |
| SRP007412_testis | 51 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001467 | ortholog_one2one | 2 retrogenes | |
| Danio rerio | ENSDARG00000011934 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000163754 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000006382 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002557 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000003516 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025899 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000015509 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_376 | 76.38 | 58.86 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1297 | 79.13 | 95.80 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000005521 retrocopies