Parental gene: | GYG1, ENSPPYG00000025899 |
| Aliases: | None |
| Description: | glycogenin 1 [Source:HGNC Symbol;Acc:4699] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 3:151768094..151802081(+) |
>ENSPPYG00000025899
ATGAGAAAAGTTTTAGAGACAGTCTTTGATGAAGTCATCATGGTAGATGTCTTGGACAGTGGCGATTCTGCTCATCTAAC
CTTAATGAAGAGGCCAGAGTTGGGTGTCACGCTGACAAAGCTCCACTGCTGGTCGCTTACACAGTATTCAAAATGTGTAT
TCATGGATGCAGATACTCTGGTCCTAGCAAATATTGATGATCTTTTTGAGAGAGAAGAATTGTCAGCAGCACCAGACCCA
GGGTGGCCTGACTGCTTCAATTCCGGAGTCTTCGTTTATCAGCCTTCAGTTGAAACATATAATCAGCTGTTGCATCTTGC
TTCTGAGCAAGGTAGTTTTGATGGTGGGGACCAAGGCATACTGAACACATTTTTTAGCAGCTGGGCAACGACAGATATCA
GAAAACACCTGCCGTTTATTTATAACCTAAGCAGCATCTCTATATACTCCTACCTCCCGGCATTTAAAGTGTTTGGTGCA
AGTGCCAAAGTTGTGCATTTCCTGGGACGAGTCAAACCATGGAATTATACTTACGATCCCAAAACAAAAAACATCAAAAG
TGAGGCCCATGATCCCAACATGACTCATCCAGAGTTTCTCATCCTGTGGTGGAATATCTTTACCACCAACGTTTTACCTC
TGCTTCAACAATTTGGCCTTGTCAAAGACACCTGCTCATATGTAAATGTGCTTTCAGACTTGGTCTATACACTGGCTTTC
TCTTGTGGCTTCTGTAGAAAGGAAGATGTCTCAGGAGCCATATCACATCTGTCCCTTGGGGAGATCCCAGCTATGGCACA
GCCGTTTGTATCCTCGGAAGAACGGAAGGAGCGATGGGAACAGGGCCAGGCTGATTATATGGGAGCAGATTCCTTTGACA
ACATCAAGAGGAAACTTGACACTTACCTCCAGTAG
ATGAGAAAAGTTTTAGAGACAGTCTTTGATGAAGTCATCATGGTAGATGTCTTGGACAGTGGCGATTCTGCTCATCTAAC
CTTAATGAAGAGGCCAGAGTTGGGTGTCACGCTGACAAAGCTCCACTGCTGGTCGCTTACACAGTATTCAAAATGTGTAT
TCATGGATGCAGATACTCTGGTCCTAGCAAATATTGATGATCTTTTTGAGAGAGAAGAATTGTCAGCAGCACCAGACCCA
GGGTGGCCTGACTGCTTCAATTCCGGAGTCTTCGTTTATCAGCCTTCAGTTGAAACATATAATCAGCTGTTGCATCTTGC
TTCTGAGCAAGGTAGTTTTGATGGTGGGGACCAAGGCATACTGAACACATTTTTTAGCAGCTGGGCAACGACAGATATCA
GAAAACACCTGCCGTTTATTTATAACCTAAGCAGCATCTCTATATACTCCTACCTCCCGGCATTTAAAGTGTTTGGTGCA
AGTGCCAAAGTTGTGCATTTCCTGGGACGAGTCAAACCATGGAATTATACTTACGATCCCAAAACAAAAAACATCAAAAG
TGAGGCCCATGATCCCAACATGACTCATCCAGAGTTTCTCATCCTGTGGTGGAATATCTTTACCACCAACGTTTTACCTC
TGCTTCAACAATTTGGCCTTGTCAAAGACACCTGCTCATATGTAAATGTGCTTTCAGACTTGGTCTATACACTGGCTTTC
TCTTGTGGCTTCTGTAGAAAGGAAGATGTCTCAGGAGCCATATCACATCTGTCCCTTGGGGAGATCCCAGCTATGGCACA
GCCGTTTGTATCCTCGGAAGAACGGAAGGAGCGATGGGAACAGGGCCAGGCTGATTATATGGGAGCAGATTCCTTTGACA
ACATCAAGAGGAAACTTGACACTTACCTCCAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 16 .64 RPM |
| SRP007412_cerebellum | 14 .11 RPM |
| SRP007412_heart | 27 .79 RPM |
| SRP007412_kidney | 7 .23 RPM |
| SRP007412_liver | 15 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000001467 | ortholog_one2one | 2 retrogenes | |
| Danio rerio | ENSDARG00000011934 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000163754 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000006382 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000005521 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002557 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000003516 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000015509 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1015 | 82.68 | 75.66 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1080 | 77.82 | 77.96 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000025899 retrocopies