RetrogeneDB ID: | retro_mluc_2351 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430238:370711..371557(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | GYG1 | ||
Ensembl ID: | ENSMLUG00000006382 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 80.48 % |
Parental protein coverage: | 86.4 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 6 |
Parental | RKVLETVFDEVIMVDV-LDSGDSAHLTLMKRPELGVTLTKLHCWSLTQYSKCVFMDADTLVLANIDDLFE |
R.VLETVFDEV...DV.LDSGDSAHLT.MKRPEL.VTLTKLHCWSLTQ.SKCVF..ADTLVLANIDDLFE | |
Retrocopy | RTVLETVFDEVLLADV<LDSGDSAHLTAMKRPELSVTLTKLHCWSLTQFSKCVFVGADTLVLANIDDLFE |
Parental | REELSAAP-DPGWPDCFNSGVFVYQPSVETYSQL-LRVASEQ-GSFDGGDQGLLNMFFSSWATTDIRKHL |
RE.LSAAP..PGWPDC.N..VFV.QPSV..YSQL....ASEQ.GSFDGGDQG.L.M.FSSWAT...R.HL | |
Retrocopy | RE-LSAAP<SPGWPDCCNPRVFVCQPSV*AYSQL<AVAASEQ<GSFDGGDQGFLDMCFSSWATSATRQHL |
Parental | PFIYNLSSISIYSYLPAFKAFGANAKVVHFLGRIKPWNYTYDPKTKSVKSESHDPTMTHPEFLSLWWDIF |
P.IYNLSSIS..SYLPAFKAFGANAKVVHFLGRIKPWNYTYDPKTKSVKSESHDPTMTHPE.LSL.W..F | |
Retrocopy | PCIYNLSSISVCSYLPAFKAFGANAKVVHFLGRIKPWNYTYDPKTKSVKSESHDPTMTHPESLSLGWGTF |
Parental | TTSVSPLLQQFGLISDTHPHLNVEDV-SGAVSH-LSLGETPATAQPFVSSEERKERWEQGQADYMGADSF |
TTS..P.....GLISD.HPHL.VEDV..GAVSH.LS.GETPATAQPFVSSE.RKERWE.GQAD.MGADSF | |
Retrocopy | TTSAHPAAAP-GLISDPHPHLRVEDV<LGAVSH<LSPGETPATAQPFVSSEKRKERWERGQADDMGADSF |
Parental | DNIKRKLDTYLQ |
.NIKRKL..YLQ | |
Retrocopy | ANIKRKLAAYLQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000001467 | 2 retrocopies | |
Danio rerio | ENSDARG00000011934 | 1 retrocopy | |
Homo sapiens | ENSG00000163754 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000006382 | 1 retrocopy |
retro_mluc_2351 ,
|
Macaca mulatta | ENSMMUG00000005521 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000002557 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000003516 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000025899 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000015509 | 1 retrocopy |