Parental gene: | MMU.3225, ENSMMUG00000013098 |
| Aliases: | None |
| Description: | None |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 3:171941358..172066274(+) |
>ENSMMUG00000013098
ATGGCCACCTTTGTGGAGCTCAGTACCAAAGCCAAGATGCCCATTGTGGGCCTGGGCACTTGGAAGTCTCCTCTCGGCAA
AGTGAAAGAAGCAGTGAAGGTGGCCATTGATGCAGGATATCGCCACATTGACTGTGCCTATGTCTATCAGAATGAACATG
AGGTGGGGGAAGCCATCCAAGAGAAGATCCAAGAGCAGGCTGTGAAGCGGGAGGACCTGTTCATCGTCAGCAAGTTGTGG
CCCACTTTCTTTGAGAGACCGCTTGTGAGGAAAGCCTTTGAGAAGACCCTCAAGGACCTGAAGCTGAGCTATCTGGACGT
CTATCTTATTCACTGGCCACAGGGATTCAAGTCTGGGGATGACATTTTACCCAAAGATGATAAAGATAATGTCATCGGTG
GAAAAGCAACGTTCTTGGATGCCTGGGAGGCCATGGAGGAGCTGGTGGATGAGGGGCTGGTGAAAGCCCTTGGCATCTCC
AATTTCAACCACTTCCAGATTGAGAGGCTCTTGAACAAACCTGGACTGAAATATAAACCAGTGACTAACCAGGTTGAGTG
TCACCCGTACCTCACGCAGGAGAAACTGATCCAGTACTGCCACTCCAAGGGCATCACCGTTACGGCCTACAGCCCCCTGG
GCTCTCCGGATAGACCTTGGGCCAAGCCAGAGGACCCTTCCCTGCTGGAGGATCCCAAGATTAAGGAGATTGCTGCAAAG
CACAAAAAAACTGCAGCCCAGGTTCTGATCCGTTTCCATATCCAGAGGAATGTGATTGTGATCCCCAAGTCTGTGACACC
GGCACGCATTGTTGAGAACATTCAGGTCTTTGACTTTAAATTGAGTGATGAGGAGATGGCAACGATACTCAGCTTCAACA
GAAACTGGAGGGCCTGCAACATGTTGCAATCCTCTCATTTGGAGGACTATCCCTTTGATGCAGAATATTGA
ATGGCCACCTTTGTGGAGCTCAGTACCAAAGCCAAGATGCCCATTGTGGGCCTGGGCACTTGGAAGTCTCCTCTCGGCAA
AGTGAAAGAAGCAGTGAAGGTGGCCATTGATGCAGGATATCGCCACATTGACTGTGCCTATGTCTATCAGAATGAACATG
AGGTGGGGGAAGCCATCCAAGAGAAGATCCAAGAGCAGGCTGTGAAGCGGGAGGACCTGTTCATCGTCAGCAAGTTGTGG
CCCACTTTCTTTGAGAGACCGCTTGTGAGGAAAGCCTTTGAGAAGACCCTCAAGGACCTGAAGCTGAGCTATCTGGACGT
CTATCTTATTCACTGGCCACAGGGATTCAAGTCTGGGGATGACATTTTACCCAAAGATGATAAAGATAATGTCATCGGTG
GAAAAGCAACGTTCTTGGATGCCTGGGAGGCCATGGAGGAGCTGGTGGATGAGGGGCTGGTGAAAGCCCTTGGCATCTCC
AATTTCAACCACTTCCAGATTGAGAGGCTCTTGAACAAACCTGGACTGAAATATAAACCAGTGACTAACCAGGTTGAGTG
TCACCCGTACCTCACGCAGGAGAAACTGATCCAGTACTGCCACTCCAAGGGCATCACCGTTACGGCCTACAGCCCCCTGG
GCTCTCCGGATAGACCTTGGGCCAAGCCAGAGGACCCTTCCCTGCTGGAGGATCCCAAGATTAAGGAGATTGCTGCAAAG
CACAAAAAAACTGCAGCCCAGGTTCTGATCCGTTTCCATATCCAGAGGAATGTGATTGTGATCCCCAAGTCTGTGACACC
GGCACGCATTGTTGAGAACATTCAGGTCTTTGACTTTAAATTGAGTGATGAGGAGATGGCAACGATACTCAGCTTCAACA
GAAACTGGAGGGCCTGCAACATGTTGCAATCCTCTCATTTGGAGGACTATCCCTTTGATGCAGAATATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 4 .13 RPM |
| SRP007412_brain | 4 .37 RPM |
| SRP007412_cerebellum | 2 .71 RPM |
| SRP007412_heart | 29 .62 RPM |
| SRP007412_kidney | 8 .57 RPM |
| SRP007412_liver | 48 .77 RPM |
| SRP007412_testis | 6 .56 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000000166 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000012250 | ortholog_one2many | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000004422 | ortholog_many2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000006005 | ortholog_one2many | 3 retrogenes | |
| Homo sapiens | ENSG00000198074 | ortholog_many2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000029762 | ortholog_many2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000052131 | ortholog_many2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000061758 | ortholog_many2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000013088 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000018018 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000019718 | ortholog_many2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000009734 | ortholog_many2many | 3 retrogenes | |
| Sorex araneus | ENSSARG00000001396 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_1357 | 57.58 | 51.27 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_2455 | 86.75 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000013098 retrocopies