Parental gene: | KHDC1, ENSMMUG00000018573 |
| Aliases: | None |
| Description: | KH homology domain-containing protein 1 [Source:RefSeq peptide;Acc:NP_001244837] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 4:69467434..69553496(-) |
>ENSMMUG00000018573
ATGGACATGGGAACTAGTGCTCTCAGCAAGAAGCCGTGGTGGACCCTGCCTGAAAACTTTCATGCTCCAATGGTGTTCCA
CATGGAAGAGGACCAGGAGGAGCTCATCTTTGGGCACGGTGACACATACCTTCGCTGCATTGAGGTGCACAGCCACACCC
TTATTCAGCTGGAGAGTTGGTTCACAGCTACAGGCCAGACTCGTGTGACTGTAGTCGGACCACATAGGGCAAGGCAGTGG
CTGCTGCACATGTTCTGTTGCGTGGGGAGCCAGGACTCCTATCATCATGCTCGAGGTGGGAGCAGAGCATGGACATGGGA
ACAGGTGCTCTCAGCAAGGAGCCGTGGTGGACCCTACCCGAAAACTTTCATGCTCCAATTGTGTTCCACATGGAAGAGGA
CCAGGAGGAGCTCATCTTCGGACTTGATGACACATACCTTCGCTGCATTGAGCTGCACAGCCACACCCTTATTCAGCTGG
TGTTTTACAGCTACAGGCCAGACTCGTGTGACCGTAGTCGGACCACCAATGGCAAAGCAGTGGCTGCTGCTCATGTTCCG
TTCCGTGGGGAGCCACTACTCCAAGTGTCACGCTCAAGGTCTGAAGATGCTCGAGCGTGTCCGAAGCCAGCCCCTGACCA
ACGACGACCTGGTCGCCTCCATTAGCCTGCCACCCTACACCGGAGACTGA
ATGGACATGGGAACTAGTGCTCTCAGCAAGAAGCCGTGGTGGACCCTGCCTGAAAACTTTCATGCTCCAATGGTGTTCCA
CATGGAAGAGGACCAGGAGGAGCTCATCTTTGGGCACGGTGACACATACCTTCGCTGCATTGAGGTGCACAGCCACACCC
TTATTCAGCTGGAGAGTTGGTTCACAGCTACAGGCCAGACTCGTGTGACTGTAGTCGGACCACATAGGGCAAGGCAGTGG
CTGCTGCACATGTTCTGTTGCGTGGGGAGCCAGGACTCCTATCATCATGCTCGAGGTGGGAGCAGAGCATGGACATGGGA
ACAGGTGCTCTCAGCAAGGAGCCGTGGTGGACCCTACCCGAAAACTTTCATGCTCCAATTGTGTTCCACATGGAAGAGGA
CCAGGAGGAGCTCATCTTCGGACTTGATGACACATACCTTCGCTGCATTGAGCTGCACAGCCACACCCTTATTCAGCTGG
TGTTTTACAGCTACAGGCCAGACTCGTGTGACCGTAGTCGGACCACCAATGGCAAAGCAGTGGCTGCTGCTCATGTTCCG
TTCCGTGGGGAGCCACTACTCCAAGTGTCACGCTCAAGGTCTGAAGATGCTCGAGCGTGTCCGAAGCCAGCCCCTGACCA
ACGACGACCTGGTCGCCTCCATTAGCCTGCCACCCTACACCGGAGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 11 .11 RPM |
| SRP007412_brain | 4 .59 RPM |
| SRP007412_cerebellum | 4 .58 RPM |
| SRP007412_heart | 2 .18 RPM |
| SRP007412_kidney | 1 .76 RPM |
| SRP007412_liver | 0 .24 RPM |
| SRP007412_testis | 3 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dipodomys ordii | ENSDORG00000009236 | ortholog_one2many | 4 retrogenes | |
| Microcebus murinus | ENSMICG00000006451 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000067750 | ortholog_many2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000028154 | ortholog_many2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000006102 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_84 | 82.03 | 78.05 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000018573 retrocopies