Parental gene:

SF3A3, ENSMMUG00000023199

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:1:40835230..40865962(-)


>ENSMMUG00000023199
ATGGAGACAATACTGGAGCAGCAGCGGCGCTATCATGAGGAGAAGGAACGGCTCATGGACGTCATGGCTAAAGAGATGCT
CACTAAGAAGTCCACGCTCCGGGACCAGATCAATTCTGATCACCGCACTCGGGCCATGCAAGATAGGTATATGGAGGTCA
GTGGGAACCTGAGGGATTTGTATGATGATAAGGATGGATTACGAAAGGAGGAGCTCAATGCCATTTCAGGACCCAATGAG
TTTGCTGAATTCTATAATAGACTCAAGCAAATAAAGGAATTCCACCGGAAGCACCCAAATGAGATCTGTGTGCCAATGTC
AGTGGAATTTGAGGAGCTCCTGAAGGCTCGAGAGAATCCGAGTGAAGAGGCACAAAACTTGGTGGAGTTCACAGATGAAG
AGGGATATGGTCGTTATCTCGATCTCCATGACTGTTACCTGAAGTACATTAACCTGAAGGCATCTGAGGAAATACTATTC
AAAATGACGTTTTCTACACCATTATCAATACAACAAGCGTATTTTACCTTTGCCAAAAATAAAAGGAGGTGGGAAAGCAA
AATATACCTAGAGATGCTGCTCGAGTACCTTCAGGACTACACAGATAGAGTGAAGCCTATCACTTGTGACAATGAGGTAT
TCCCTGCCAAGTATGCTATGTTTTTGGAGAGAATGTGGACCAACCTTACCTTCATCCTAAACCTGAAAGAGACAAGCAGT
GCTCTGACCCATGCTGGAGCCCATCTTGACCTCTCTGCATTCTCCTCCTGGGAGGAGTTGGCCTCTCTGGGTTTGGACAG
ATTGAAATCTGCTCTCTTAGCTTTAGGCTTGAAATGTGGCGGGACCCTAGAAGAGCGAGCCCAGAGACTCTTCAGCACCA
AAGGAAAGTCCCTGGAGTCACTTGATACCTCTTTGTTTGCCAAAAATCCCAAGTCAAAGGGCACCAAGCGTAGAGTCAGA
ATAGATGAGACTGTTTTCTGTTGTTCTACAATAGCCTCAGAAAGAACCTTATCTTTGGAAGAACAGCGACATCTCACTCA
TGAAAATGTACAGCGCAAGCAAGCCAGGACAGGAGAAGAGCGAGAAGAGGAGGAAGAAGAGCAGATCAGTGAGAGTGAGA
GTGAAGATGAAGAGAACGAGATCATTTACAACCCCAAAAACCTGCCACTTGGCTGGGATGGCAAACCTATTCCCTACTGG
CTGTATAAACTTCATGGCCTAAATATCAACTACAACTGTGAGATTTGTGGAAACTACACCTACCGAGGACCCAAAGCCTT
CCAGCGACACTTTGCTGAATGGCGTCACGCTCATGGCATGAGGTGTTTGGGCATCCCAAACACTGCTCACTTTGCTAATG
TGACACAGATTGAAGATGCTGTCTCCTTGTGGGCCAAACTGAAATTGCAGAAGGCTTCAGAGCGATGGCAGCCTGACACT
GAGGAAGAATATGAAGATTCAAGTGGGAATGTTGTGAATAAGAAGACCTATGAGGATCTGAAAAGACAAGGACTGCTCTA
G

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 26 .58 RPM
SRP007412_brain 36 .53 RPM
SRP007412_cerebellum 26 .54 RPM
SRP007412_heart 18 .31 RPM
SRP007412_kidney 30 .52 RPM
SRP007412_liver 14 .41 RPM
SRP007412_testis 128 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001262 ortholog_one2one 1 retrogene
retro_amel_485,
Canis familiaris ENSCAFG00000003222 ortholog_one2many 1 retrogene
retro_cfam_176,
Callithrix jacchus ENSCJAG00000002176 ortholog_one2one 1 retrogene
retro_cjac_4109,
Cavia porcellus ENSCPOG00000008660 ortholog_one2one 1 retrogene
retro_cpor_658,
Homo sapiens ENSG00000183431 ortholog_one2one 2 retrogenes
retro_hsap_2441, retro_hsap_937,
Macropus eugenii ENSMEUG00000002534 ortholog_one2one 3 retrogenes
retro_meug_1135, retro_meug_1346, retro_meug_642,
Monodelphis domestica ENSMODG00000017729 ortholog_one2many 1 retrogene
retro_mdom_269,
Nomascus leucogenys ENSNLEG00000011720 ortholog_one2one 1 retrogene
retro_nleu_2775,
Pan troglodytes ENSPTRG00000000559 ortholog_one2one 2 retrogenes
retro_ptro_1411, retro_ptro_649,
Sorex araneus ENSSARG00000014204 ortholog_one2one 1 retrogene
retro_sara_407,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_631 76.95 62.65
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMMUG00000023199 retrocopies