Parental gene:

PDHB, ENSMODG00000002398

Aliases:None
Description:pyruvate dehydrogenase (lipoamide) beta [Source:HGNC Symbol;Acc:8808]
Organism:Opossum (Monodelphis domestica)
Coordinates:6:209314775..209324107(-)


>ENSMODG00000002398
ATGGCGGCAGGGATAGTGCGAGGTGGGCTCGCCGGCTGCGGGCAGCAGGTGGCCCGGCTGCTGAGGAGACGCTTCCATCG
CTCGGCGCCCGCCGCGCTGCAGGTGACGGTCCGAGATGCCTTGAATCAGGGGATGGATGAAGAACTGGAACGGGACGAGA
GGGTCTTCTTGCTTGGAGAAGAAGTTGCTCAGTATGACGGGGCCTACAAGGTCAGCCGGGGGCTGTGGAAGAAGTATGGG
GACAAGAGAATCATCGACACACCAATATCGGAGATGGGCTTTGCTGGGATTGCTGTCGGGGCAGCTATGGCTGGATTAAG
GCCCATCTGTGAATTCATGACCTTCAATTTCTCTATGCAAGCAATTGACCAGGTTATAAACTCAGCCGCCAAGACTTACT
ACATGTCTGGTGGGCTTCAGCCTGTGCCCATTGTCTTCAGGGGACCTAATGGTGCTTCAGCTGGCGTGGCTGCCCAGCAT
TCCCAGTGCTTTGCAGCTTGGTATGGGCACTGTCCTGGATTAAAAGTGGTCAGTCCTTGGAGTTCAGAGGATGCAAAAGG
TCTCATTAAATCAGCAATCCGGGATGATAATCCAGTTGTGGTACTGGAAAATGAGCTGATGTATGGAGTTCCTTTTGAAT
TTCCAGATGAAGCTCAGTCAAAAGATTTCCTGATTCCTATTGGAAAAGCTAAAATAGAAAGGCAAGGAACCCACGTTACA
TTGGTTTCCCACTCACGACCTGTTGGCCACTGTATGGAAGCAGCTGCCATATTATCTAAAGAAGGAGTAGAATGTGAGGT
GATCAATATGCGGACCATCAGACCAATGGACACACAAACCATTGAGGCCAGCGTGATGAAGACCAATCATCTCATCACCG
TCGAAGGAGGCTGGCCCCAGTTTGGGGTGGGAGCAGAGATTTGCTCAAGTATCATGGAAGGTCCTGCATTTAACTTCCTT
GATGCTCCCGCTGCCCGCGTCACGGGTGCCGATGTTCCAATGCCTTACGCAAAGCTGCTGGAAGAAAACTGTGTCCCTCA
GGTCAAGGACATCATCTTTGCAGTCAAGAAGACACTGAATATCTAA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021724 ortholog_one2one 1 retrogene
retro_btau_596,
Canis familiaris ENSCAFG00000007340 ortholog_one2many 2 retrogenes
retro_cfam_1215, retro_cfam_2031,
Callithrix jacchus ENSCJAG00000019739 ortholog_one2one 1 retrogene
retro_cjac_3875,
Dasypus novemcinctus ENSDNOG00000006937 ortholog_one2one 1 retrogene
retro_dnov_1090,
Mus musculus ENSMUSG00000021748 ortholog_one2one 1 retrogene
retro_mmus_290,
Oryctolagus cuniculus ENSOCUG00000015632 ortholog_one2many 1 retrogene
retro_ocun_342,
Procavia capensis ENSPCAG00000016595 ortholog_one2one 1 retrogene
retro_pcap_261,
Sarcophilus harrisii ENSSHAG00000008480 ortholog_one2many 1 retrogene
retro_shar_5,
Ictidomys tridecemlineatus ENSSTOG00000019553 ortholog_one2one 2 retrogenes
retro_itri_1349, retro_itri_249,
Tupaia belangeri ENSTBEG00000016148 ortholog_one2one 2 retrogenes
retro_tbel_1651, retro_tbel_3170,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_614 64.60 61.22
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Download FASTA sequences of all ENSMODG00000002398 retrocopies