Parental gene:

PSMC6, ENSMODG00000014500

Aliases:None
Description:proteasome (prosome, macropain) 26S subunit, ATPase, 6 [Source:HGNC Symbol;Acc:9553]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:299198292..299235354(-)


>ENSMODG00000014500
ATGGCGGACCCGAGAGATAAGGCTCTTCAGGACTACCGTAAGAAGCTGCTAGAGCACAAGGAGATCGATGGACGCCTCAA
AGAATTAAGAGAACAGCTAAAAGAGCTTACCAAGCAATATGAAAAGTCTGAAAATGATCTGAAGGCCTTACAAAGTGTTG
GGCAGATTGTGGGTGAAGTACTTAAACAGTTAACAGAAGAAAAATTCATTGTTAAAGCAACAAATGGACCAAGATATGTT
GTGGGTTGTCGGCGTCAGCTTGACAAAAGTAAGCTGAAGCCAGGGACAAGAGTTGCTCTGGATATGACTACACTAACTAT
TATGAGATACTTGCCAAGAGAAGTTGATCCGCTGGTTTACAATATGTCTCATGAGGACCCTGGGAATGTTTCTTATTCAG
AGATTGGAGGGCTCTCTGAACAAATCAGAGAATTAAGAGAGGTAATAGAATTGCCTCTTACAAATCCTGAGTTATTTCAG
CGTGTAGGAATAATACCTCCAAAAGGATGTTTACTATATGGACCACCAGGAACAGGAAAAACACTCTTGGCAAGAGCTGT
TGCTAGCCAACTGGATTGCAATTTTTTAAAGGTTGTATCCAGTTCAATTGTAGACAAGTACATTGGTGAAAGTGCTCGTT
TGATCAGAGAAATGTTTAATTATGCCAGGGATCACCAACCATGCATCATTTTCATGGATGAAATAGATGCTATTGGTGGC
CGTCGTTTTTCTGAGGGTACTTCAGCTGATAGAGAAATTCAGAGGACCCTAATGGAGTTACTGAATCAGATGGATGGATT
TGATACTTTACACAGAGTCAAAATGATCATGGCTACAAACAGACCAGACACATTGGATCCTGCTTTGTTGCGTCCAGGAA
GATTAGATAGAAAAATACATATTGATTTGCCAAATGAACAAGCAAGATTAGACATTTTGAAGATTCATGCAGGTCCTATC
ACAAAACATGGGGAAATAGATTATGAAGCAATTGTGAAGCTCTCAGATGGCTTTAATGGAGCAGATCTGAGAAATGTTTG
CACTGAAGCAGGTATGTTTGCAATTCGTGCTGATCATGATTTTGTAGTACAGGAAGATTTCATGAAAGCAGTCAGAAAAG
TGGCTGATTCTAAGAAGCTGGAATCTAAACTAGATTATAAACCTGTTTAA

Library Parental gene expression (RPM)
SRP007412_brain 263 .78 RPM
SRP007412_cerebellum 233 .09 RPM
SRP007412_heart 264 .74 RPM
SRP007412_kidney 231 .76 RPM
SRP007412_liver 256 .28 RPM
SRP007412_testis 125 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007126 ortholog_one2many 2 retrogenes
retro_cjac_204, retro_cjac_3221,
Cavia porcellus ENSCPOG00000009477 ortholog_one2many 1 retrogene
retro_cpor_47,
Homo sapiens ENSG00000100519 ortholog_one2one 2 retrogenes
retro_hsap_1022, retro_hsap_4059,
Gorilla gorilla ENSGGOG00000002152 ortholog_one2one 2 retrogenes
retro_ggor_2727, retro_ggor_808,
Macropus eugenii ENSMEUG00000007084 ortholog_one2one 3 retrogenes
retro_meug_1700, retro_meug_2090, retro_meug_923,
Nomascus leucogenys ENSNLEG00000012518 ortholog_one2one 2 retrogenes
retro_nleu_559, retro_nleu_900,
Otolemur garnettii ENSOGAG00000010011 ortholog_one2one 1 retrogene
retro_ogar_3101,
Pongo abelii ENSPPYG00000005820 ortholog_one2one 2 retrogenes
retro_pabe_3334, retro_pabe_858,
Pan troglodytes ENSPTRG00000006352 ortholog_one2one 2 retrogenes
retro_ptro_2752, retro_ptro_699,
Rattus norvegicus ENSRNOG00000007203 ortholog_one2one 1 retrogene
retro_rnor_1480,
Tursiops truncatus ENSTTRG00000003880 ortholog_one2one 1 retrogene
retro_ttru_117,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_438 61.97 71.21
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMODG00000014500 retrocopies