Parental gene:

Rab5b, ENSMUSG00000000711

Aliases:Rab5b, C030027M18Rik
Description:RAB5B, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:105938]
Organism:Mouse (Mus musculus)
Coordinates:10:128677192..128696268(-)


>ENSMUSG00000000711
ATGACTAGCAGAAGTACAGCCAGGCCCAATGGGCAACCCCAGGCCAGCAAAATATGCCAGTTCAAATTGGTCCTGCTGGG
AGAGTCTGCAGTGGGGAAGTCTAGCCTGGTGTTACGTTTTGTCAAAGGACAGTTCCATGAATACCAGGAAAGCACCATTG
GAGCGGCCTTCCTCACCCAATCCGTGTGTTTAGATGACACAACAGTCAAGTTTGAGATCTGGGACACTGCTGGGCAGGAG
CGATACCACAGTTTAGCCCCTATGTACTACAGGGGTGCCCAGGCTGCAATCGTGGTCTATGATATTACTAATCAGGAAAC
GTTTGCTCGGGCAAAGACATGGGTAAAGGAACTACAGCGGCAAGCCAGCCCTAGCATTGTTATTGCCTTGGCAGGGAACA
AAGCTGACCTTGCCAACAAGCGCATGGTGGAGTATGAAGAGGCTCAGGCATATGCAGATGACAACAGCTTATTATTTATG
GAGACTTCAGCTAAGACTGCTATGAACGTGAATGATCTCTTCCTGGCAATAGCAAAGAAGTTGCCAAAGAGCGAACCCCA
GAATCTGGGGGGTGCGGCAGGCCGAAGTCGGGGTGTGGATCTTCATGAGCAGTCCCAGCAGAACAAGAGCCAGTGTTGTA
GCAACTGA

Library Parental gene expression (RPM)
SRP007412_brain 69 .29 RPM
SRP007412_cerebellum 69 .78 RPM
SRP007412_heart 50 .43 RPM
SRP007412_kidney 65 .74 RPM
SRP007412_liver 56 .72 RPM
SRP007412_testis 21 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007527 ortholog_one2one 2 retrogenes
retro_cjac_1215, retro_cjac_1879,
Dasypus novemcinctus ENSDNOG00000016952 ortholog_one2one 1 retrogene
retro_dnov_350,
Equus caballus ENSECAG00000023306 ortholog_one2one 1 retrogene
retro_ecab_280,
Echinops telfairi ENSETEG00000009603 ortholog_one2one 2 retrogenes
retro_etel_617, retro_etel_698,
Mus musculus ENSMUSG00000017831 within_species_paralog 1 retrogene
retro_mmus_1645,
Nomascus leucogenys ENSNLEG00000017570 ortholog_one2one 1 retrogene
retro_nleu_2531,
Oryctolagus cuniculus ENSOCUG00000013895 ortholog_one2one 1 retrogene
retro_ocun_1193,
Ochotona princeps ENSOPRG00000007883 ortholog_one2one 3 retrogenes
retro_opri_1061, retro_opri_1116, retro_opri_299,
Procavia capensis ENSPCAG00000010486 ortholog_one2many 1 retrogene
retro_pcap_380,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2081 100.00 100.00
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Download FASTA sequences of all ENSMUSG00000000711 retrocopies