Parental gene: | Pwp1, ENSMUSG00000001785 |
| Aliases: | Pwp1, 2310058A11Rik, 2610205J09Rik, AI098170, AL022879, AV083409, AW550690 |
| Description: | PWP1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914735] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 10:85871830..85889096(+) |
>ENSMUSG00000001785
ATGAACCGCAGCCGCCAAGTGACCTGCGTGGCCTGGGTCCGCCGCGGCGTGGCCAAAGAGACTCCAGACAAGGTAGAGCT
AAGTAAAGAGGAAGTGAACCGTCTCATCGCTGAAGCAAAAGGAAAGTTGCAAGAAGAAGGTGGGAGTGAAGAAGAGGAGG
CAGGCAACCCTTCAGAAGATGGCATGCAGAGTGGCCCGACCCAGGCACCGCCTAGGGAGTCCCTGGAGGATGGGGATCCA
CAAGATGACCGCACACTGGACGATGACGAGCTGGCGGGGTACGACTTAGATAATTATGACGAAGAGGATAACCCAGATGC
TGAGACCATTGGCGAGTCTCTGTTGGGTCTTACGGTCTATGGCAGTAATGACCAGGATCCATATGTCACCTTGAAAGACA
CGGAACAATATGAGCATGAAGATTTCTTGATTAAGCCGACTGACAACCTCATCGTTTGTGGCCGTGCTGAACAAGAGCAG
TGCAATCTAGAGGTGCACGTTTACAATCAAGAAGAGGAGTCTTTCTACGTCCACCATGACATACTCCTGTCTGCATACCC
TCTGAGTGTGGAATGGCTGAATTTTGATCCTAGCCCAGATGCATCTACTGGGAATTACATTGCTGTGGGAAACATGACTC
CTGTCATCGAGGTATGGGACCTGGATATAGTGGACTCTCTAGAACCAGTCTTCACACTGGGAAGCAAGCTTTCCAAAAAG
AAGAAGAAGAAAGGGAAGAAGAGTTCCTCAGCAGAAGGACATACTGATGCTGTCCTTGACCTATCCTGGAATAAGACAGT
CAGAAATGTGCTTGCAAGTGCATCGGCAGACAGCACTGTAGTTCTCTGGGATCTGTCTGTGGGGAAGTCAGTAGCCAGGC
TTACTGCACATACAGACAAGGTTCAGACTCTGCAGTTTCATCCATTTGAAGCACAGACTCTGATTTCTGGGTCCTATGAC
AAATCGGTGGCTCTGTATGACTGCAGAGATCCCAGCCAGAACCACCGCCAGTGGCGGTTCAGTGGGCAGATCGAGAGAGT
GACCTGGAACCACTTCTCACCGTGTCATTTCTTGGCCAGTACAGATGATGGCTTTGTCTATAACCTGGATGCACGTTCAG
ACAAGCCAATCTTTACACTTAATGCACACAACGATGAAATCTCTGGTCTTGATCTTAGCAGTCAGATCAAAGGCTGCCTT
GTGACTGCTTCCGCTGACAAATTTGTGAAGATCTGGGACATCTTAGGAGATAGGCCAAGTCTCATTCACTCTAGAGACAT
GAAAATGGGAGTTCTCTTTTGTTCCTCCTGCTGTCCTGACTTGCCATTTGTTTATGCCTTTGGAGGACAGAAAGAAGGGC
TTCGGGTTTGGGACATAAGCACTGTGTCTTCAGTAAATGAAGCATTTGGAAGACGGGAGCGACTCGTTATAGGCGGCACG
AAAGGTTTATCTGTTAGCGGCCCCTGTGGGAGCAGGAGTCCACAGCAGACACCAATGGAGTCCTGA
ATGAACCGCAGCCGCCAAGTGACCTGCGTGGCCTGGGTCCGCCGCGGCGTGGCCAAAGAGACTCCAGACAAGGTAGAGCT
AAGTAAAGAGGAAGTGAACCGTCTCATCGCTGAAGCAAAAGGAAAGTTGCAAGAAGAAGGTGGGAGTGAAGAAGAGGAGG
CAGGCAACCCTTCAGAAGATGGCATGCAGAGTGGCCCGACCCAGGCACCGCCTAGGGAGTCCCTGGAGGATGGGGATCCA
CAAGATGACCGCACACTGGACGATGACGAGCTGGCGGGGTACGACTTAGATAATTATGACGAAGAGGATAACCCAGATGC
TGAGACCATTGGCGAGTCTCTGTTGGGTCTTACGGTCTATGGCAGTAATGACCAGGATCCATATGTCACCTTGAAAGACA
CGGAACAATATGAGCATGAAGATTTCTTGATTAAGCCGACTGACAACCTCATCGTTTGTGGCCGTGCTGAACAAGAGCAG
TGCAATCTAGAGGTGCACGTTTACAATCAAGAAGAGGAGTCTTTCTACGTCCACCATGACATACTCCTGTCTGCATACCC
TCTGAGTGTGGAATGGCTGAATTTTGATCCTAGCCCAGATGCATCTACTGGGAATTACATTGCTGTGGGAAACATGACTC
CTGTCATCGAGGTATGGGACCTGGATATAGTGGACTCTCTAGAACCAGTCTTCACACTGGGAAGCAAGCTTTCCAAAAAG
AAGAAGAAGAAAGGGAAGAAGAGTTCCTCAGCAGAAGGACATACTGATGCTGTCCTTGACCTATCCTGGAATAAGACAGT
CAGAAATGTGCTTGCAAGTGCATCGGCAGACAGCACTGTAGTTCTCTGGGATCTGTCTGTGGGGAAGTCAGTAGCCAGGC
TTACTGCACATACAGACAAGGTTCAGACTCTGCAGTTTCATCCATTTGAAGCACAGACTCTGATTTCTGGGTCCTATGAC
AAATCGGTGGCTCTGTATGACTGCAGAGATCCCAGCCAGAACCACCGCCAGTGGCGGTTCAGTGGGCAGATCGAGAGAGT
GACCTGGAACCACTTCTCACCGTGTCATTTCTTGGCCAGTACAGATGATGGCTTTGTCTATAACCTGGATGCACGTTCAG
ACAAGCCAATCTTTACACTTAATGCACACAACGATGAAATCTCTGGTCTTGATCTTAGCAGTCAGATCAAAGGCTGCCTT
GTGACTGCTTCCGCTGACAAATTTGTGAAGATCTGGGACATCTTAGGAGATAGGCCAAGTCTCATTCACTCTAGAGACAT
GAAAATGGGAGTTCTCTTTTGTTCCTCCTGCTGTCCTGACTTGCCATTTGTTTATGCCTTTGGAGGACAGAAAGAAGGGC
TTCGGGTTTGGGACATAAGCACTGTGTCTTCAGTAAATGAAGCATTTGGAAGACGGGAGCGACTCGTTATAGGCGGCACG
AAAGGTTTATCTGTTAGCGGCCCCTGTGGGAGCAGGAGTCCACAGCAGACACCAATGGAGTCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 17 .43 RPM |
| SRP007412_cerebellum | 14 .16 RPM |
| SRP007412_heart | 16 .44 RPM |
| SRP007412_kidney | 15 .23 RPM |
| SRP007412_liver | 12 .12 RPM |
| SRP007412_testis | 12 .49 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macaca mulatta | ENSMMUG00000015544 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000031574 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011940 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000005350 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000011036 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1600 | 78.32 | 56.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_3074 | 68.59 | 61.48 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000001785 retrocopies