Parental gene: | Vmp1, ENSMUSG00000018171 |
| Aliases: | Vmp1, 3110098I04Rik, 4930579A11Rik, AI787464, Tango5, Tmem49, ni-2 |
| Description: | vacuole membrane protein 1 [Source:MGI Symbol;Acc:MGI:1923159] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 11:86583864..86683836(-) |
>ENSMUSG00000018171
ATGGCAGAGAATGGAAAAAATTGTGACCAGAGACGCATAGCAATGAGTAAGGATCAGCACAATGGAAGTCTCACAGACCC
CTCTTCAGTTCATGAGAAGAAGAGAAGGGATCGGGAAGAAAGACAGAATATTGTCCTGTGGAGACAGCCACTCATTACCT
TGCAGTATTTCTCTCTGGAAACTCTTGTAGTTTTGAAGGAATGGACCTCAAAATTGTGGCATCGTCAAAGCATTGTGGTG
TCCTTTTTACTGCTGCTTGCTGCGCTTGTAGCTACGTATTATGTGGAAGGAGCGCACCAACAGTATGTGCAGCGGATAGA
GAAGCAGTTTCTTTTGTATGCATACTGGATAGGCCTGGGGATTTTGTCCTCTGTTGGTCTTGGAACAGGACTGCACACCT
TTCTGCTTTATCTGGGCCCACATATAGCTTCAGTTACATTAGCTGCTTATGAATGCAATTCGGTGAATTTCCCTGAGCCA
CCCTATCCTGACCAGATTATCTGCCCAGAGGAAGAAGGCGCTGAGGGAGCCATTTCTTTGTGGAGTATCATCTCAAAAGT
TAGAATTGAAGCCTGCATGTGGGGCATTGGAACAGCCATTGGAGAGCTGCCTCCATATTTCATGGCCAGGGCAGCTCGCC
TCTCAGGTGCTGAACCAGATGATGAAGAGTATCAGGAATTTGAAGAAATGCTGGAACATGCAGAGGCTGCACAAGACTTT
GCATCACGGGCTAAACTGGCAGTTCAAAAACTAGTACAGAAAGTTGGATTTTTTGGAATTTTGGCCTGTGCTTCTATTCC
AAACCCCCTGTTTGACCTGGCTGGAATAACGTGTGGGCACTTCCTTGTACCTTTCTGGACCTTCTTTGGTGCAACCCTGA
TTGGGAAAGCAATCATTAAAATGCATATCCAGAAAATATTTGTTATAGTAACTTTCAGCAAGCACATCGTGGAGCAGATG
GTGACTTTCATTGGTGCTGTCCCCGGCATAGGTCCGTCTCTGCAGAAGCCTTTTCAAGAGTACCTGGAGGCGCAGCGGCA
GAAGCTTCATCACAGAAGTGAAGCGGGCACACCGCAGGGAGAAAACTGGTTATCCTGGATGTTTGAGAAGCTGGTGGTTG
CAATGGTGTGTTACTTTGTCCTGTCTATTATTAACTCCATGGCACAAAACTATGCCAAACGAATCCAGCAGCGCTTGAAC
TCAGAGGAGAAAACTAAATAA
ATGGCAGAGAATGGAAAAAATTGTGACCAGAGACGCATAGCAATGAGTAAGGATCAGCACAATGGAAGTCTCACAGACCC
CTCTTCAGTTCATGAGAAGAAGAGAAGGGATCGGGAAGAAAGACAGAATATTGTCCTGTGGAGACAGCCACTCATTACCT
TGCAGTATTTCTCTCTGGAAACTCTTGTAGTTTTGAAGGAATGGACCTCAAAATTGTGGCATCGTCAAAGCATTGTGGTG
TCCTTTTTACTGCTGCTTGCTGCGCTTGTAGCTACGTATTATGTGGAAGGAGCGCACCAACAGTATGTGCAGCGGATAGA
GAAGCAGTTTCTTTTGTATGCATACTGGATAGGCCTGGGGATTTTGTCCTCTGTTGGTCTTGGAACAGGACTGCACACCT
TTCTGCTTTATCTGGGCCCACATATAGCTTCAGTTACATTAGCTGCTTATGAATGCAATTCGGTGAATTTCCCTGAGCCA
CCCTATCCTGACCAGATTATCTGCCCAGAGGAAGAAGGCGCTGAGGGAGCCATTTCTTTGTGGAGTATCATCTCAAAAGT
TAGAATTGAAGCCTGCATGTGGGGCATTGGAACAGCCATTGGAGAGCTGCCTCCATATTTCATGGCCAGGGCAGCTCGCC
TCTCAGGTGCTGAACCAGATGATGAAGAGTATCAGGAATTTGAAGAAATGCTGGAACATGCAGAGGCTGCACAAGACTTT
GCATCACGGGCTAAACTGGCAGTTCAAAAACTAGTACAGAAAGTTGGATTTTTTGGAATTTTGGCCTGTGCTTCTATTCC
AAACCCCCTGTTTGACCTGGCTGGAATAACGTGTGGGCACTTCCTTGTACCTTTCTGGACCTTCTTTGGTGCAACCCTGA
TTGGGAAAGCAATCATTAAAATGCATATCCAGAAAATATTTGTTATAGTAACTTTCAGCAAGCACATCGTGGAGCAGATG
GTGACTTTCATTGGTGCTGTCCCCGGCATAGGTCCGTCTCTGCAGAAGCCTTTTCAAGAGTACCTGGAGGCGCAGCGGCA
GAAGCTTCATCACAGAAGTGAAGCGGGCACACCGCAGGGAGAAAACTGGTTATCCTGGATGTTTGAGAAGCTGGTGGTTG
CAATGGTGTGTTACTTTGTCCTGTCTATTATTAACTCCATGGCACAAAACTATGCCAAACGAATCCAGCAGCGCTTGAAC
TCAGAGGAGAAAACTAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 74 .78 RPM |
| SRP007412_cerebellum | 50 .15 RPM |
| SRP007412_heart | 30 .10 RPM |
| SRP007412_kidney | 65 .83 RPM |
| SRP007412_liver | 69 .23 RPM |
| SRP007412_testis | 14 .82 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000014339 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000724 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000003967 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000016264 | ortholog_one2many | 1 retrogene | |
| Drosophila melanogaster | FBgn0052675 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_2640 | 83.82 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000018171 retrocopies