Parental gene: | Vmp1, ENSRNOG00000003967 |
| Aliases: | Vmp1, Tmem49 |
| Description: | Vacuole membrane protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q91ZQ0] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 10:76098588..76196545(+) |
>ENSRNOG00000003967
ATGGCAGAGAATGGAACAAATTGTGACCAGAGACGTGGAGCAATGAGTAAGGAACAGCATAATGGGAGTTTCACAGACCC
CTCTTCAGTAAATGAGAAGAAGAGAAGGGATCGGGAAGAAAGACAGAATATCGTCCTGTGGAGACAGCCACTCATTACCT
TGCAGTATTTCTCTCTGGAAACTCTTGTAGTTTTGAAGGAATGGACCTCAAAATTGTGGCATCGTCAAAGCATGGTGGTG
TCCTTTTTCCTGCTGCTTGCTGCGCTTGTAGCTACGTATTATGTGGAAGGAGCGCACCAGCAGTATGTGCAGCGGATAGA
GAAGCAGTTTCTTTTATATGCCTACTGGATAGGCCTGGGGATTCTGTCCTCTGTTGGTCTTGGAACAGGATTGCACACCT
TTCTGCTTTATCTGGGCCCACATATAGCTTCAGTTACATTAGCTGCTTATGAATGCAATTCGGTTAATTTCCCTGAGCCA
CCCTATCCTGACCAGATTATCTGCCCAGACGAAGAAGGCACTGAAGGAGCCATATCTTTGTGGAGTATCATCTCAAAAGT
TAGAATTGAAGCCTGCATGTGGGGCATTGGGACAGCAATTGGGGAGCTGCCTCCATATTTCATGGCCAGGGCAGCTCGCC
TCTCAGGTGCTGAACCAGATGATGAAGAGTATCAGGAATTTGAAGAAATGCTGGAACACGCAGAGACTGCACAAGACTTT
GCATCACGAGCTAAACTGGCAGTTCAAAAACTAGTACAGAAAGTTGGATTTTTTGGAATTTTGGCCTGTGCTTCTATTCC
AAATCCCCTGTTCGACCTGGCTGGAATAACATGTGGACACTTCCTTGTACCTTTTTGGACCTTCTTTGGTGCAACCCTGA
TTGGAAAAGCAATCATTAAAATGCATATCCAGAAAATCTTTGTTATAGTAACTTTCAGCAAACACATCGTGGAGCAGATG
GTGGCTTTCATTGGGGCTGTACCCGGCATAGGTCCGTCTCTGCAGAAGCCTTTTCAGGAATACCTGGAGGCCCAGCGGCA
GAAGCTCCACCATAGAAGCGAAGCAGGCACAGCGCAGGGAGAAAACTGGTTATCCTGGACGTTTGAGAAGCTGGTCGTTG
CCATGGTGTGTTACTTTATCCTGTCTATCATTAACTCCATGGCACAAAGCTATGCCAAACGAATCCAGCAGCGCTTGAAC
TCAGAGGAGAAGACTAAATAA
ATGGCAGAGAATGGAACAAATTGTGACCAGAGACGTGGAGCAATGAGTAAGGAACAGCATAATGGGAGTTTCACAGACCC
CTCTTCAGTAAATGAGAAGAAGAGAAGGGATCGGGAAGAAAGACAGAATATCGTCCTGTGGAGACAGCCACTCATTACCT
TGCAGTATTTCTCTCTGGAAACTCTTGTAGTTTTGAAGGAATGGACCTCAAAATTGTGGCATCGTCAAAGCATGGTGGTG
TCCTTTTTCCTGCTGCTTGCTGCGCTTGTAGCTACGTATTATGTGGAAGGAGCGCACCAGCAGTATGTGCAGCGGATAGA
GAAGCAGTTTCTTTTATATGCCTACTGGATAGGCCTGGGGATTCTGTCCTCTGTTGGTCTTGGAACAGGATTGCACACCT
TTCTGCTTTATCTGGGCCCACATATAGCTTCAGTTACATTAGCTGCTTATGAATGCAATTCGGTTAATTTCCCTGAGCCA
CCCTATCCTGACCAGATTATCTGCCCAGACGAAGAAGGCACTGAAGGAGCCATATCTTTGTGGAGTATCATCTCAAAAGT
TAGAATTGAAGCCTGCATGTGGGGCATTGGGACAGCAATTGGGGAGCTGCCTCCATATTTCATGGCCAGGGCAGCTCGCC
TCTCAGGTGCTGAACCAGATGATGAAGAGTATCAGGAATTTGAAGAAATGCTGGAACACGCAGAGACTGCACAAGACTTT
GCATCACGAGCTAAACTGGCAGTTCAAAAACTAGTACAGAAAGTTGGATTTTTTGGAATTTTGGCCTGTGCTTCTATTCC
AAATCCCCTGTTCGACCTGGCTGGAATAACATGTGGACACTTCCTTGTACCTTTTTGGACCTTCTTTGGTGCAACCCTGA
TTGGAAAAGCAATCATTAAAATGCATATCCAGAAAATCTTTGTTATAGTAACTTTCAGCAAACACATCGTGGAGCAGATG
GTGGCTTTCATTGGGGCTGTACCCGGCATAGGTCCGTCTCTGCAGAAGCCTTTTCAGGAATACCTGGAGGCCCAGCGGCA
GAAGCTCCACCATAGAAGCGAAGCAGGCACAGCGCAGGGAGAAAACTGGTTATCCTGGACGTTTGAGAAGCTGGTCGTTG
CCATGGTGTGTTACTTTATCCTGTCTATCATTAACTCCATGGCACAAAGCTATGCCAAACGAATCCAGCAGCGCTTGAAC
TCAGAGGAGAAGACTAAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 41 .69 RPM |
| SRP017611_kidney | 58 .41 RPM |
| SRP017611_brain | 70 .39 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000014339 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000018171 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000724 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000016264 | ortholog_one2many | 1 retrogene | |
| Drosophila melanogaster | FBgn0052675 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_527 | 92.28 | 79.56 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000003967 retrocopies