Parental gene: | Ppm1a, ENSMUSG00000021096 |
| Aliases: | Ppm1a, 2310003C21Rik, 2900017D14Rik, AI427932, AU017636, MMPa-2, MPPa-1 |
| Description: | protein phosphatase 1A, magnesium dependent, alpha isoform [Source:MGI Symbol;Acc:MGI:99878] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 12:72761210..72794940(+) |
>ENSMUSG00000021096
ATGGGAGCATTTTTAGACAAGCCAAAGATGGAGAAGCATAATGCCCAGGGGCAGGGGAATGGGTTACGATACGGCCTAAG
CAGCATGCAAGGTTGGCGAGTTGAAATGGAGGACGCACACACGGCTGTGATCGGTTTGCCAAGTGGACTTGAGACATGGT
CATTCTTTGCTGTATATGATGGGCATGCTGGTTCTCAGGTTGCCAAATACTGCTGTGAGCACTTGTTAGATCACATCACC
AATAACCAGGATTTCAGAGGATCTGCAGGAGCACCTTCTGTGGAGAACGTAAAGAATGGAATCAGAACAGGGTTTCTGGA
GATTGATGAACACATGAGAGTTATGTCAGAGAAGAAACATGGTGCAGATAGAAGCGGGTCAACAGCTGTGGGCGTCTTAA
TCTCTCCCCAACATACTTATTTCATTAACTGTGGAGACTCGAGAGGTTTACTTTGTAGGAATAGAAAAGTTCACTTCTTC
ACACAAGACCATAAACCAAGTAACCCGCTGGAAAAAGAACGAATTCAGAATGCAGGGGGCTCGGTGATGATTCAGCGTGT
CAATGGCTCTCTGGCTGTATCGAGGGCCCTTGGGGATTTCGATTACAAATGTGTCCATGGAAAAGGTCCCACAGAGCAGC
TTGTCTCCCCAGAGCCCGAAGTCCATGATATTGAAAGGTCTGAAGAAGATGACCAGTTCATCATCCTTGCATGCGATGGC
ATCTGGGACGTCATGGGGAACGAAGAGCTCTGTGACTTTGTGAGATCCAGACTTGAAGTCACTGATGACCTTGAGAAAGT
TTGCAATGAAGTAGTCGACACCTGCTTGTATAAGGGAAGTCGAGACAACATGAGTGTGATTTTGATCTGTTTTCCAAGTG
CACCCAAAGTCTCGGCAGAGGCGGTGAAGAAGGAGGCGGAGCTGGACAAGTACCTGGAGAGCAGAGTAGAAGAAATCATA
AAGAAGCAGGTGGAAGGCGTCCCTGACTTAGTCCACGTGATGCGCACGTTAGCCAGTGAGAACATCCCCAGCCTCCCACC
AGGGGGTGAATTGGCAAGCAAGCGGAATGTAATTGAAGCCGTTTACAATAGACTGAACCCTTACAAAAATGACGACACTG
ATTCTGCGTCAACCGATGATATGTGGTAA
ATGGGAGCATTTTTAGACAAGCCAAAGATGGAGAAGCATAATGCCCAGGGGCAGGGGAATGGGTTACGATACGGCCTAAG
CAGCATGCAAGGTTGGCGAGTTGAAATGGAGGACGCACACACGGCTGTGATCGGTTTGCCAAGTGGACTTGAGACATGGT
CATTCTTTGCTGTATATGATGGGCATGCTGGTTCTCAGGTTGCCAAATACTGCTGTGAGCACTTGTTAGATCACATCACC
AATAACCAGGATTTCAGAGGATCTGCAGGAGCACCTTCTGTGGAGAACGTAAAGAATGGAATCAGAACAGGGTTTCTGGA
GATTGATGAACACATGAGAGTTATGTCAGAGAAGAAACATGGTGCAGATAGAAGCGGGTCAACAGCTGTGGGCGTCTTAA
TCTCTCCCCAACATACTTATTTCATTAACTGTGGAGACTCGAGAGGTTTACTTTGTAGGAATAGAAAAGTTCACTTCTTC
ACACAAGACCATAAACCAAGTAACCCGCTGGAAAAAGAACGAATTCAGAATGCAGGGGGCTCGGTGATGATTCAGCGTGT
CAATGGCTCTCTGGCTGTATCGAGGGCCCTTGGGGATTTCGATTACAAATGTGTCCATGGAAAAGGTCCCACAGAGCAGC
TTGTCTCCCCAGAGCCCGAAGTCCATGATATTGAAAGGTCTGAAGAAGATGACCAGTTCATCATCCTTGCATGCGATGGC
ATCTGGGACGTCATGGGGAACGAAGAGCTCTGTGACTTTGTGAGATCCAGACTTGAAGTCACTGATGACCTTGAGAAAGT
TTGCAATGAAGTAGTCGACACCTGCTTGTATAAGGGAAGTCGAGACAACATGAGTGTGATTTTGATCTGTTTTCCAAGTG
CACCCAAAGTCTCGGCAGAGGCGGTGAAGAAGGAGGCGGAGCTGGACAAGTACCTGGAGAGCAGAGTAGAAGAAATCATA
AAGAAGCAGGTGGAAGGCGTCCCTGACTTAGTCCACGTGATGCGCACGTTAGCCAGTGAGAACATCCCCAGCCTCCCACC
AGGGGGTGAATTGGCAAGCAAGCGGAATGTAATTGAAGCCGTTTACAATAGACTGAACCCTTACAAAAATGACGACACTG
ATTCTGCGTCAACCGATGATATGTGGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 146 .81 RPM |
| SRP007412_cerebellum | 124 .75 RPM |
| SRP007412_heart | 115 .21 RPM |
| SRP007412_kidney | 104 .35 RPM |
| SRP007412_liver | 126 .41 RPM |
| SRP007412_testis | 332 .16 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Mus musculus | ENSMUSG00000061130 | within_species_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000003689 | ortholog_one2one | 1 retrogene | |
| Drosophila melanogaster | FBgn0035425 | possible_ortholog | 1 retrogene | |
| Drosophila melanogaster | FBgn0086361 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_2925 | 74.15 | 52.09 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2926 | 75.12 | 52.09 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000021096 retrocopies