Parental gene: | Hsp90ab1, ENSMUSG00000023944 |
| Aliases: | Hsp90ab1, 90kDa, AL022974, C81438, Hsp84, Hsp84-1, Hsp90, Hspcb |
| Description: | heat shock protein 90 alpha (cytosolic), class B member 1 [Source:MGI Symbol;Acc:MGI:96247] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 17:45567774..45573271(-) |
>ENSMUSG00000023944
ATGCCTGAGGAAGTGCACCATGGAGAGGAGGAGGTGGAGACCTTTGCCTTTCAGGCAGAAATTGCCCAGCTCATGTCCCT
CATCATCAACACTTTCTATTCAAACAAGGAGATTTTCCTCCGCGAGTTGATCTCTAATGCTTCAGATGCCCTGGACAAGA
TTCGATATGAGAGCCTGACGGACCCTTCTAAGTTGGACAGTGGGAAAGAGCTGAAAATTGACATCATCCCCAACCCTCAG
GAGCGCACGCTGACTTTGGTGGACACAGGCATTGGCATGACCAAGGCTGACCTCATTAATAACCTGGGAACCATTGCTAA
GTCTGGCACGAAGGCGTTCATGGAGGCTCTCCAGGCTGGTGCAGACATCTCCATGATCGGGCAGTTTGGTGTCGGATTCT
ACTCGGCCTATCTAGTTGCAGAGAAAGTGGTTGTGATCACGAAGCACAATGATGATGAGCAGTATGCCTGGGAGTCGTCT
GCGGGTGGCTCCTTCACCGTCCGGGCAGACCATGGTGAGCCCATTGGCCGGGGTACCAAAGTGATCCTTCACCTCAAAGA
AGACCAGACAGAGTACTTGGAGGAGAGGAGGGTCAAGGAAGTGGTGAAGAAACATTCGCAGTTCATAGGCTATCCCATCA
CCCTCTATTTGGAGAAGGAACGGGAGAAGGAGATCAGTGATGATGAGGCAGAGGAAGAGAAAGGTGAGAAAGAGGAGGAA
GATAAGGAGGATGAGGAGAAGCCTAAGATTGAAGATGTGGGATCCGATGAGGAAGATGACAGCGGCAAAGACAAGAAAAA
GAAAACAAAGAAGATCAAAGAGAAGTACATTGACCAGGAGGAGCTGAACAAGACAAAGCCTATCTGGACCAGAAACCCGG
ATGACATCACGCAGGAGGAGTATGGCGAATTCTATAAGAGCCTCACCAATGACTGGGAGGACCACTTGGCAGTCAAGCAC
TTCTCTGTAGAAGGTCAGTTGGAATTCAGGGCATTGCTCTTCATTCCCCGGCGGGCTCCCTTCGACCTTTTTGAGAACAA
GAAGAAGAAGAACAACATCAAATTGTATGTCCGCCGTGTGTTCATCATGGACAGCTGTGACGAGCTGATACCTGAGTACC
TCAACTTTATCCGCGGTGTGGTTGACTCCGAGGACCTGCCCCTGAACATCTCCCGGGAGATGCTGCAGCAGAGCAAGATC
CTGAAGGTCATCCGCAAGAACATCGTCAAGAAGTGCCTGGAGCTCTTCTCCGAGCTGGCTGAGGACAAGGAGAACTACAA
GAAGTTCTATGAGGCCTTCTCCAAAAATTTAAAGCTTGGAATTCATGAAGATTCCACTAACCGACGCCGCCTCTCTGAGC
TCCTTCGCTATCACACCTCTCAGTCTGGAGATGAGATGACCTCCTTGTCAGAGTATGTGTCTCGCATGAAGGAGACCCAG
AAGTCCATCTACTATATCACTGGTGAGAGCAAAGAGCAAGTGGCCAACTCTGCCTTTGTGGAGCGAGTGCGGAAGCGGGG
CTTCGAGGTGGTGTATATGACTGAGCCTATTGACGAGTACTGCGTGCAGCAGCTCAAGGAGTTTGATGGGAAGAGCCTGG
TCTCAGTGACTAAGGAGGGCCTGGAGCTACCAGAGGACGAGGAAGAGAAGAAGAAAATGGAGGAGAGCAAGGCAAAGTTT
GAGAATCTCTGCAAGCTCATGAAGGAGATCTTGGACAAGAAGGTTGAAAAGGTGACAATCTCCAATAGGCTTGTGTCTTC
ACCCTGCTGCATTGTGACAAGCACCTATGGCTGGACAGCCAACATGGAACGGATCATGAAGGCCCAGGCACTGCGAGACA
ACTCTACAATGGGCTACATGATGGCCAAAAAACACCTGGAGATCAACCCTGACCACCCCATCGTGGAGACCCTGCGGCAG
AAGGCTGAGGCAGACAAAAACGACAAAGCTGTCAAGGACCTGGTGGTGCTGCTGTTTGAAACTGCTCTGCTCTCCTCTGG
TTTCTCACTTGAGGATCCCCAAACCCACTCCAACCGCATCTACCGCATGATTAAACTAGGCCTGGGCATCGATGAAGATG
AGGTCACTGCAGAGGAGCCCAGTGCTGCTGTTCCTGATGAGATCCCCCCTCTGGAAGGCGATGAGGATGCCTCGCGCATG
GAAGAGGTGGATTAA
ATGCCTGAGGAAGTGCACCATGGAGAGGAGGAGGTGGAGACCTTTGCCTTTCAGGCAGAAATTGCCCAGCTCATGTCCCT
CATCATCAACACTTTCTATTCAAACAAGGAGATTTTCCTCCGCGAGTTGATCTCTAATGCTTCAGATGCCCTGGACAAGA
TTCGATATGAGAGCCTGACGGACCCTTCTAAGTTGGACAGTGGGAAAGAGCTGAAAATTGACATCATCCCCAACCCTCAG
GAGCGCACGCTGACTTTGGTGGACACAGGCATTGGCATGACCAAGGCTGACCTCATTAATAACCTGGGAACCATTGCTAA
GTCTGGCACGAAGGCGTTCATGGAGGCTCTCCAGGCTGGTGCAGACATCTCCATGATCGGGCAGTTTGGTGTCGGATTCT
ACTCGGCCTATCTAGTTGCAGAGAAAGTGGTTGTGATCACGAAGCACAATGATGATGAGCAGTATGCCTGGGAGTCGTCT
GCGGGTGGCTCCTTCACCGTCCGGGCAGACCATGGTGAGCCCATTGGCCGGGGTACCAAAGTGATCCTTCACCTCAAAGA
AGACCAGACAGAGTACTTGGAGGAGAGGAGGGTCAAGGAAGTGGTGAAGAAACATTCGCAGTTCATAGGCTATCCCATCA
CCCTCTATTTGGAGAAGGAACGGGAGAAGGAGATCAGTGATGATGAGGCAGAGGAAGAGAAAGGTGAGAAAGAGGAGGAA
GATAAGGAGGATGAGGAGAAGCCTAAGATTGAAGATGTGGGATCCGATGAGGAAGATGACAGCGGCAAAGACAAGAAAAA
GAAAACAAAGAAGATCAAAGAGAAGTACATTGACCAGGAGGAGCTGAACAAGACAAAGCCTATCTGGACCAGAAACCCGG
ATGACATCACGCAGGAGGAGTATGGCGAATTCTATAAGAGCCTCACCAATGACTGGGAGGACCACTTGGCAGTCAAGCAC
TTCTCTGTAGAAGGTCAGTTGGAATTCAGGGCATTGCTCTTCATTCCCCGGCGGGCTCCCTTCGACCTTTTTGAGAACAA
GAAGAAGAAGAACAACATCAAATTGTATGTCCGCCGTGTGTTCATCATGGACAGCTGTGACGAGCTGATACCTGAGTACC
TCAACTTTATCCGCGGTGTGGTTGACTCCGAGGACCTGCCCCTGAACATCTCCCGGGAGATGCTGCAGCAGAGCAAGATC
CTGAAGGTCATCCGCAAGAACATCGTCAAGAAGTGCCTGGAGCTCTTCTCCGAGCTGGCTGAGGACAAGGAGAACTACAA
GAAGTTCTATGAGGCCTTCTCCAAAAATTTAAAGCTTGGAATTCATGAAGATTCCACTAACCGACGCCGCCTCTCTGAGC
TCCTTCGCTATCACACCTCTCAGTCTGGAGATGAGATGACCTCCTTGTCAGAGTATGTGTCTCGCATGAAGGAGACCCAG
AAGTCCATCTACTATATCACTGGTGAGAGCAAAGAGCAAGTGGCCAACTCTGCCTTTGTGGAGCGAGTGCGGAAGCGGGG
CTTCGAGGTGGTGTATATGACTGAGCCTATTGACGAGTACTGCGTGCAGCAGCTCAAGGAGTTTGATGGGAAGAGCCTGG
TCTCAGTGACTAAGGAGGGCCTGGAGCTACCAGAGGACGAGGAAGAGAAGAAGAAAATGGAGGAGAGCAAGGCAAAGTTT
GAGAATCTCTGCAAGCTCATGAAGGAGATCTTGGACAAGAAGGTTGAAAAGGTGACAATCTCCAATAGGCTTGTGTCTTC
ACCCTGCTGCATTGTGACAAGCACCTATGGCTGGACAGCCAACATGGAACGGATCATGAAGGCCCAGGCACTGCGAGACA
ACTCTACAATGGGCTACATGATGGCCAAAAAACACCTGGAGATCAACCCTGACCACCCCATCGTGGAGACCCTGCGGCAG
AAGGCTGAGGCAGACAAAAACGACAAAGCTGTCAAGGACCTGGTGGTGCTGCTGTTTGAAACTGCTCTGCTCTCCTCTGG
TTTCTCACTTGAGGATCCCCAAACCCACTCCAACCGCATCTACCGCATGATTAAACTAGGCCTGGGCATCGATGAAGATG
AGGTCACTGCAGAGGAGCCCAGTGCTGCTGTTCCTGATGAGATCCCCCCTCTGGAAGGCGATGAGGATGCCTCGCGCATG
GAAGAGGTGGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 1372 .48 RPM |
| SRP007412_cerebellum | 1586 .48 RPM |
| SRP007412_heart | 1520 .80 RPM |
| SRP007412_kidney | 1889 .41 RPM |
| SRP007412_liver | 1439 .73 RPM |
| SRP007412_testis | 375 .01 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000001981 | ortholog_one2one | 4 retrogenes | |
| Felis catus | ENSFCAG00000009764 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000008889 | possible_ortholog | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000013735 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000005239 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000022686 | possible_ortholog | 2 retrogenes | |
| Mus musculus | ENSMUSG00000021270 | within_species_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011961 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000016655 | possible_ortholog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000019834 | possible_ortholog | 6 retrogenes | |
| Tupaia belangeri | ENSTBEG00000014873 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_856 | 80.76 | 86.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_1916 | 81.32 | 62.71 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_3528 | 83.93 | 73.76 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000023944 retrocopies