Parental gene:

Zxdc, ENSMUSG00000034430

Aliases:Zxdc, A930012H20, B930086F11Rik, BC003332
Description:ZXD family zinc finger C [Source:MGI Symbol;Acc:MGI:1933108]
Organism:Mouse (Mus musculus)
Coordinates:6:90369491..90403490(+)


>ENSMUSG00000034430
ATGGACCTCCCGGCGGTGCTGGCCGCCCCGGCCACGCGCGGAGACCAACATGGCGGTGGCCCGAGCCGACTTCGCCGCGG
CGCGGGGCCGTCCCTCGGTGCCGGTCCCGGGCGCCGTCGCCTGCTGCTGCTGAGGGGCCCGGAAGATGGCGGGCCCGGGC
CGCGTCCAGAGGAGGCCCCGGGGCCCAGCCCGCCGCCCCCGGAGGACGGCGGCGACTCCTTCGTGGTACTGCTGGAAGTG
CCGCGCGCGGCCGACACCCATGGTCAGGAGGAGGCCGAGCCCGATTCGGGCGCGAGCCCCACGGAACAGGTCCCGGCCGC
CGCCCCCGGCGCAGCTCTGGCAGGCACGGTCACCATCCACAACCAGGACCTCCTGGTGCGCTTCGACCGCGGCGTCTTCA
CGCTGGCTGCGGCGCCCGCGCCAGCCGCCCCGAGCCTGCATCCCGCGACCACCCCGGGCCTGGAGCCCTCGAGCGCTGCT
GCGTCCCGCCGCGGGCCGGTGGCCGCTAGCGCTGGCTCCCCGGCCTACCGCTGTCCGGAGCCGCAGTGCGCGCTGAGCTT
CGCCAAGAAGCACCAGTTGAAGGTGCACCTGCTGACGCACGGCAGCCTCCAGGGCCGGCGGCCCTTCAAGTGCCCGCTGG
ATGGCTGCGGCTGGGCCTTCACCACCTCCTACAAGCTCAAACGGCACCTGCAGTCGCATGACAAGCTGCGTCCCTTTAGC
TGCCCGGTGGGCGGCTGCGGCAAGAAGTTCACCACCGTCTACAACCTCAAGGCGCACATGAAGGGCCACGAGCAGGAGAG
CTTGTTCAAGTGCGAGGTGTGCGCCGAGCGCTTCCCCACACACGCCAAGCTCAACTCCCACCAGCGCAGCCACTTCGAGC
CCGAGCGGCCTTACAAGTGTGATTTCCCCGGCTGTGAGAAGACGTTCATCACAGTGAGTGCCCTGTTTTCCCATAATCGA
GCCCACTTCAGGGAGCAAGAGCTCTTTTCCTGCTCCTTTCCTGGGTGCAATAAACAATATGACAAAGCCTGCCGACTGAA
AATTCACTTGCGAAGTCACACAGGTGAAAGACCATTTATTTGTGACTCAGACAGTTGTGGCTGGACCTTCACCAGTATGT
CCAAACTTCTAAGACACAAAAGGAAACATGATGATGACCGGAGGTTCACTTGCCCTGTTGAAGGTTGTGGCAAGTCATTC
ACTAGAGCAGAGCATCTGAAGGGCCACAGTATCACCCACCTGGGAACAAAGCCATTCGAATGCCCTGTGGAAGGGTGCTG
TGCCAGGTTCTCAGCTCGCAGCAGTCTGTACATTCATTCTAAGAAACATCTGCAGGACGTGGGTACTCCGAAAAGCCGCT
GCCCAGTGTCCAGCTGCAACCGACTCTTCACCTCCAAGCATAGCATGAAGGCACACGTGGTGCGGCAGCACAGCCGGCGC
CAAGATCTTGTACCTCAGCTGGAAGCTCCGAGCTCTCTCACACCCAGCAGTGAACTGAGTAGCCCAGGCCAAAGTGAGCT
CACCAACATAGATCTCGCAGCACTTTTCTCTGACACACCTGCTAATAGCAGCAGTTCAACAGCTGGGTCGGATGAAGCAC
TGAACTCTGGGATCCTCACCATTGATGTCACTTCTGTGAGCTCTTCTCTGGGAGGGAATCTCCCTACTAACAATAACTCC
TTAGGACCAATGGATCCACTCGTTCTAGTGGCCCACGGTGATATGCCTCCAAGTTTGGACAGTCCTCTTGTTCTTGGGAC
ATCGGCCACGGTTCTCCAACCAGGCAGCTTCAGTGCAGATGATTCACAGGCCATGAGCACAGGAGCAGTAGGCTGCCTGG
TGGCTCTGCCTGTGAGGAACTTGAATCAAGACTCTCCAGCTTTGACCCCCAGCAATAACTTGACAGCACCTGGTACCACA
CCAACTTCTTCAGACACCACCCAAGAAACTGGCAGTGTGCCAGATCTGCTGGTTCCAATAAAGGTGGAACAAGACTTGTC
TCCTGTCCCAGATGTGGTCCAGGGGCAGAAAGAAAGCCATGGGCCATCCCAATCTGTGCTGTCCAGCTCTACAGAGAGGC
CAGGGGCTCAGAAGGACTCAGAGCTCAGTGCTGGCACAGGCAGTCTCTACTTGGAAAGTGGGGGCTCAGCAAGAACTGAT
TACCGAGCCATTCAACTAGTCAAGAAAAAAAAGCAGAAAGGAACTGGGAGCGATGAAGGAGCCTCTGACTCTGCTCACAG
GAAAGTAAAAGGTGGCACGATCAACCCTCCTCATGTCCACTCAGGCCAGCACAGTTGTTTCTGTGGAACTCTCATGGTAC
CCAGTGGAGGTCTGACAGTGCCAGCCCCTGCAGCTGGGCTGCAGTGTGTCCAGATCCCTGTTCTGCAGGATGACCCCTCA
GGTGAAGGAGGCTTACCACTGGGCCTCAGCCCACAGCGCTCTGCCTTCCACCCCTACTTCACCGTGGATCTGCCTGTCTA
CGTCCTCCAGGAGGTGCTTCCAGCACCTGGAGGTTTTGCTGGACTGGAGACTGCACAGGTACCAGGAAGTACTATCAACC
TGCGGGACCTTGAGTGA

Library Parental gene expression (RPM)
SRP007412_brain 24 .37 RPM
SRP007412_cerebellum 23 .40 RPM
SRP007412_heart 15 .35 RPM
SRP007412_kidney 20 .04 RPM
SRP007412_liver 14 .09 RPM
SRP007412_testis 9 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006438 ortholog_one2one 1 retrogene
retro_amel_1830,
Equus caballus ENSECAG00000026954 ortholog_one2one 2 retrogenes
retro_ecab_1064, retro_ecab_1107,
Rattus norvegicus ENSRNOG00000025818 ortholog_one2one 1 retrogene
retro_rnor_2933,
Sus scrofa ENSSSCG00000001824 ortholog_one2one 1 retrogene
retro_sscr_50,
Ictidomys tridecemlineatus ENSSTOG00000007207 ortholog_one2one 1 retrogene
retro_itri_60,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_44 64.51 78.75
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Download FASTA sequences of all ENSMUSG00000034430 retrocopies